5L74

Plexin A2 extracellular segment domains 4-5 (PSI2-IPT2), resolution 1.36 Angstrom

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF07736	e5l74A1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07736	ECOD (1.6)
A	PSI_3	e5l74A2	A: few secondary structure elements	X: Trefoil/Plexin domain-like (From Topology)	H: Trefoil/Plexin domain-like (From Topology)	T: Trefoil/Plexin domain-like	F: PSI_3	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01437	Plexin repeat (PSI)	Plexin repeat	-	Family
A	PF18020	TIG domain found in plexin (TIG_2)	TIG domain found in plexin	This entry represents a TIG domain found in plexin proteins. TIG domains have an Ig-like fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Plexin-A2	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity semaphorin receptor activity identical protein binding protein binding binding	developmental process multicellular organismal process limb development appendage development limb bud formation anatomical structure morphogenesis multicellular organism development appendage morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development limb morphogenesis localization centrosome localization microtubule organizing center localization developmental process multicellular organismal process limb development appendage development limb bud formation anatomical structure morphogenesis multicellular organism development appendage morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development limb morphogenesis localization centrosome localization microtubule organizing center localization cellular process somitogenesis epithelium development chordate embryonic development segmentation anterior/posterior pattern specification pattern specification process embryo development tissue development regionalization embryo development ending in birth or egg hatching somite development positive regulation of nervous system development axonogenesis regulation of cellular process cell projection organization regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell development positive regulation of developmental process cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation positive regulation of cell projection organization system development regulation of biological process regulation of cell projection organization positive regulation of cell development nervous system development generation of neurons positive regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process regulation of developmental process plasma membrane bounded cell projection morphogenesis positive regulation of biological process cell development cell morphogenesis cellular component organization regulation of nervous system development neurogenesis positive regulation of cell differentiation regulation of axonogenesis positive regulation of neurogenesis regulation of multicellular organismal process cellular component organization or biogenesis positive regulation of axonogenesis regulation of anatomical structure morphogenesis positive regulation of cellular process regulation of multicellular organismal development plasma membrane bounded cell projection organization biological regulation axon development cell morphogenesis involved in neuron differentiation neuron development regulation of plasma membrane bounded cell projection organization regulation of cell motility regulation of locomotion regulation of cell migration cell migration cell motility locomotion head development animal organ development brain development central nervous system development cerebellar granule cell precursor tangential migration hindbrain development hindbrain tangential cell migration cell migration in hindbrain pharyngeal system development regulation of cell shape regulation of cell morphogenesis regulation of biological quality cellular response to stimulus cell surface receptor signaling pathway response to stimulus signaling signal transduction cell communication semaphorin-plexin signaling pathway neural tube development tube development cell adhesion regulation of cell adhesion negative regulation of cellular process negative regulation of biological process negative regulation of cell adhesion semaphorin-plexin signaling pathway involved in neuron projection guidance semaphorin-plexin signaling pathway involved in axon guidance axon guidance neuron projection guidance	cell periphery extracellular matrix external encapsulating structure collagen-containing extracellular matrix cellular anatomical entity plasma membrane membrane protein-containing complex semaphorin receptor complex receptor complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002909	IPT domain	Domain
A	IPR042826	Plexin-A2, sema domain	Domain
A	IPR041362	Plexin, TIG domain 2	Domain
A	IPR016201	PSI domain	Domain
A	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A	IPR008936	Rho GTPase activation protein	Homologous Superfamily
A	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A	IPR002165	Plexin repeat	Repeat
A	IPR041019	Plexin, TIG domain 1	Domain
A	IPR031148	Plexin family	Family
A	IPR046800	Plexin, cytoplasmic RhoGTPase-binding domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR013548	Plexin, cytoplasmic RasGAP domain	Domain
A	IPR036352	Sema domain superfamily	Homologous Superfamily
A	IPR001627	Sema domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.