Solution structure of a portion of the 5'UTR of HspA mRNA from Bradyrhizobium janponicum having deleted G83
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D-NOESY-13CHSQC | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
| 2 | 2D-NOESY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
| 3 | 2D-HSQC | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
| 4 | TOCSY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
| 5 | HCcHTOCSY | RNA | 30mM NaCl | 6.0 | 1 atm | 303 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX AVANCE | 600 |
| 2 | Bruker | DRX AVANCE | 900 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| NMR | 20 structures | Amber |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 50 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations,lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | Amber | 7 | David Case et al. |
| 2 | processing | DYANA | ||
