Solution NMR structure of ligand free sterol carrier protein 2 like 2 from Aedes aegypti
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.7 mM [U-100% 15N] entity-1 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 2 | 2D 1H-13C HSQC | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 3 | 3D CBCA(CO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 4 | 3D HNCO | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 5 | 3D HNCACB | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 6 | 3D HBHA(CO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 7 | 3D H(CCO)NH | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 8 | 3D HCCH-TOCSY | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 9 | 3D 1H-13C NOESY aliphatic | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| 10 | 3D 1H-15N NOESY | 0.7 mM [U-100% 13C; U-100% 15N] entity-2 | 90% H2O/10% D2O | 100 | 7.0 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DGSA-distance geometry simulated annealing | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 2 | refinement | MOLMOL | Koradi, Billeter and Wuthrich | |
| 3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 4 | geometry optimization | PSVS | Bhattacharya and Montelione | |
| 5 | data analysis | Sparky | Goddard | |
| 6 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
| 7 | collection | TopSpin | Bruker Biospin | |
| 8 | data analysis | XEASY | Bartels et al. | |
| 9 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
