5B3Y
Crystal structure of hPin1 WW domain (5-23) fused with maltose-binding protein
- PDB DOI: https://doi.org/10.2210/pdb5B3Y/pdb
- Classification: ISOMERASE,SUGAR BINDING PROTEIN
- Organism(s): Homo sapiens, Escherichia coli K-12
- Expression System: Escherichia coli
- Mutation(s): Yes 
- Deposited: 2016-03-17 Released: 2016-10-26 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.189 
- R-Value Work: 0.165 
- R-Value Observed: 0.166 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein | 390 | Homo sapiens, Escherichia coli K-12 This entity is chimeric | Mutation(s): 1  Gene Names: PIN1, malE | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Find proteins for Q13526 (Homo sapiens) Explore Q13526  Go to UniProtKB:  Q13526 | |||||
PHAROS:  Q13526 GTEx:  ENSG00000127445  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P0AEX9Q13526 | ||||
Sequence AnnotationsExpand | |||||
|
Oligosaccharides
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | B | alpha-maltose | Oligosaccharide / Nutrient |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.189 
- R-Value Work: 0.165 
- R-Value Observed: 0.166 
- Space Group: P 21 21 21
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 48.296 | α = 90 |
b = 57.637 | β = 90 |
c = 124.056 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
Entry History 
Deposition Data
- Released Date: 2016-10-26  Deposition Author(s): Hanazono, Y., Takeda, K., Miki, K.
Revision History (Full details and data files)
- Version 1.0: 2016-10-26
Type: Initial release - Version 1.1: 2020-02-26
Changes: Data collection, Derived calculations - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Non-polymer description, Structure summary - Version 2.1: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary