6UZ7

K.lactis 80S ribosome with p/PE tRNA and eIF5B


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Long-range interdomain communications in eIF5B regulate GTP hydrolysis and translation initiation.

Huang, B.Y.Fernandez, I.S.

(2020) Proc Natl Acad Sci U S A 117: 1429-1437

  • DOI: https://doi.org/10.1073/pnas.1916436117
  • Primary Citation of Related Structures:  
    6UZ7

  • PubMed Abstract: 

    Translation initiation controls protein synthesis by regulating the delivery of the first aminoacyl-tRNA to messenger RNAs (mRNAs). In eukaryotes, initiation is sophisticated, requiring dozens of protein factors and 2 GTP-regulated steps. The GTPase eIF5B gates progression to elongation during the second GTP-regulated step. Using electron cryomicroscopy (cryo-EM), we imaged an in vitro initiation reaction which is set up with purified yeast components and designed to stall with eIF5B and a nonhydrolyzable GTP analog. A high-resolution reconstruction of a "dead-end" intermediate at 3.6 Å allowed us to visualize eIF5B in its ribosome-bound conformation. We identified a stretch of residues in eIF5B, located close to the γ-phosphate of GTP and centered around the universally conserved tyrosine 837 ( Saccharomyces cerevisiae numbering), that contacts the catalytic histidine of eIF5B (H480). Site-directed mutagenesis confirmed the essential role that these residues play in regulating ribosome binding, GTP hydrolysis, and translation initiation both in vitro and in vivo. Our results illustrate how eIF5B transmits the presence of a properly delivered initiator aminoacyl-tRNA at the P site to the distant GTPase center through interdomain communications and underscore the importance of the multidomain architecture in translation factors to sense and communicate ribosomal states.


  • Organizational Affiliation

    Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032.


Macromolecules

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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D16027pD [auth AA]254Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CQM3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3E [auth AB]387Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CJR7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B07139pF [auth AC]363Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CW41 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D06941pG [auth AD]297Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CRR9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B04686pH [auth AE]175Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWE7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D03410pI [auth AF]241Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CS71 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E00573pJ [auth AG]255Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for B4UN96 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F04499pK [auth AH]191Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CLA6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D05643pL [auth AI]220Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CRX7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F08261pM [auth AJ]174Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CKT4 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13N [auth AL]199Kluyveromyces lactisMutation(s): 0 
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Find proteins for Q875M0 (Kluyveromyces lactis)
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B13409pO [auth AM]138Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CVB1 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L15P [auth AN]204Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CJL7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F04675pQ [auth AO]199Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CL98 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0A06336pR [auth AP]184Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CXQ6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0A07227pS [auth AQ]186Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CXL8 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E12453pT [auth AR]189Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CNH9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L20U [auth AS]172Kluyveromyces lactisMutation(s): 0 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E23651pV [auth AT]160Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CM20 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D05181pW [auth AU]122Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CRZ8 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E06997pX [auth AV]137Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CP75 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L24Y [auth AW]155Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P38665 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L25Z [auth AX]142Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P48045 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B05742pAA [auth AY]127Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CW97 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E03455pBA [auth AZ]136Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CPN9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
RPL28CA [auth Ba]149Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q8J287 (Kluyveromyces lactis)
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29DA [auth Bb]62Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L30EA [auth Bc]105Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P38664 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B02937pFA [auth Bd]114Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWM6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E06843pGA [auth Be]130Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CP82 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D07405pHA [auth Bf]107Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0C08371pIA [auth Bg]125Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CU17 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F05247pJA [auth Bh]120Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CL71 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36KA [auth Bi]100Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CR18 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L37LA [auth Bj]88Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CUW0 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0C18216pMA [auth Bk]78Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CSS8 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L39NA [auth Bl]51Kluyveromyces lactisMutation(s): 0 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin fusion proteinOA [auth Bm]128Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q9Y854 (Kluyveromyces lactis)
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L41PA [auth Bn]23Kluyveromyces lactisMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L44QA [auth Bo]106Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P31027 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E05941pRA [auth Bp]92Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CPC5 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal proteinSA [auth Bq]217Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWR9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
60S acidic ribosomal protein P0TA [auth Br]311Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CW89 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
GDPCPUA [auth AK]147Kluyveromyces lactisMutation(s): 0 
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S0VA [auth A]254Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CN12 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S1WA [auth B]255Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWD0 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F09812pXA [auth C]259Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CKL3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D08305pYA [auth D]237Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CRK7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4ZA [auth E]261Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWJ2 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0D10659pAB [auth F]227Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CRA3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6BB [auth G]236Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CM04 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7CB [auth H]190Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CTD6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8DB [auth I]201Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CMG3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E23673pEB [auth J]188Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CM18 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B08173pFB [auth K]106Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CVZ5 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0A10483pGB [auth L]156Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CX80 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12HB [auth M]134Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F18040pIB [auth N]151Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14JB [auth O]137Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P27069 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F07843pKB [auth P]142Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16LB [auth Q]143Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q875N2 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B01474pMB [auth R]136Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0B01562pNB [auth S]146Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CWT9 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0A07194pOB [auth T]144Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F25542pPB [auth U]117Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CIM1 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S21QB [auth V]87Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CXT6 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S22RB [auth W]130Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CW21 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
RPS23SB [auth X]145Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24TB [auth Y]135Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CU44 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25UB [auth Z]108Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CW78 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S26VB [auth a]119Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CS01 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27WB [auth b]82Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28XB [auth c]67Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P33285 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S29YB [auth d]56Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CPG3 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30ZB [auth e]63Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CUH5 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-40S ribosomal protein S27aAC [auth f]150Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for P69061 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0E12277pBC [auth g]326Kluyveromyces lactisMutation(s): 0 
UniProt
Find proteins for Q6CNI7 (Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37))
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
KLLA0F23265pDC [auth 1]967Kluyveromyces lactisMutation(s): 0 
UniProt
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Entity ID: 1
MoleculeChains LengthOrganismImage
25S ribosomal RNAA [auth 5]3,364Kluyveromyces lactis
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Entity ID: 2
MoleculeChains LengthOrganismImage
RNA (121-MER)B [auth 7]121Kluyveromyces lactis
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Entity ID: 3
MoleculeChains LengthOrganismImage
5.8S ribosomal RNAC [auth 8]2,825Kluyveromyces lactis
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Entity ID: 81
MoleculeChains LengthOrganismImage
18S ribosomal RNACC [auth 2]1,798Kluyveromyces lactis
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Entity ID: 83
MoleculeChains LengthOrganismImage
RNA (76-MER)EC [auth 3]76Saccharomyces cerevisiae
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-01-15
    Type: Initial release
  • Version 1.1: 2020-02-05
    Changes: Database references
  • Version 1.2: 2024-03-06
    Changes: Data collection, Database references, Refinement description