Sequence Similarity Clusters for the Entities in PDB 1CBS

Entity #1 | Chains: A
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE II protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 4968
95 % 30 72 596 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 30 72 625
70 % 30 75 607
50 % 30 75 656
40 % 98 199 203
30 % 154 330 102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures