Sequence Similarity Clusters for the Entities in PDB 1FCC

Entity #1 | Chains: A,B
IGG1 MO61 FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 1602
95 % 171 182 118 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 79 89 265
70 % 186 199 124
50 % 197 210 133
40 % 197 210 150
30 % 215 229 137
Entity #2 | Chains: C,D
STREPTOCOCCAL PROTEIN G (C2 FRAGMENT) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56769
95 % 1 1 43581 Flexibility: Medium
Max RMSD: 13.0, Avg RMSD: 3.3
PDBFlex
90 % 28 54 491
70 % 45 78 345
50 % 45 79 405
40 % 45 87 413
30 % 45 87 427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures