Sequence Similarity Clusters for the Entities in PDB 1FCC

Entity #1 | Chains: A,B
IGG1 MO61 FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 1532
95 % 165 176 118 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 78 88 256
70 % 180 192 124
50 % 191 203 139
40 % 191 203 154
30 % 194 206 157
Entity #2 | Chains: C,D
STREPTOCOCCAL PROTEIN G (C2 FRAGMENT) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36148
95 % 22 40 663 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 25 49 600
70 % 52 87 310
50 % 75 138 225
40 % 75 138 238
30 % 75 138 255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures