Sequence Similarity Clusters for the Entities in PDB 1FCC

Entity #1 | Chains: A,B
IGG1 MO61 FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 1580
95 % 168 179 119 Flexibility: Low
Max RMSD: 10.4, Avg RMSD: 1.5
PDBFlex
90 % 79 89 256
70 % 183 196 124
50 % 194 207 129
40 % 194 207 148
30 % 197 210 152
Entity #2 | Chains: C,D
STREPTOCOCCAL PROTEIN G (C2 FRAGMENT) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49596
95 % 1 1 43007 Flexibility: Medium
Max RMSD: 13.0, Avg RMSD: 3.3
PDBFlex
90 % 27 53 485
70 % 52 88 316
50 % 52 97 356
40 % 52 97 376
30 % 52 97 388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures