1Q3V

Crystal structure of a wild-type Cre recombinase-loxP synapse: phosphotyrosine covalent intermediate


Sequence Similarity Clusters for the Entities in PDB 1Q3V

Entity #1 | Chains: C,G
loxP DNA dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: X,Y
loxP DNA dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,H
loxP DNA dna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: A,B,E,F
Cre recombinase protein, length: 347 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 1604
95 % 24 24 1129
90 % 24 24 1171
70 % 24 24 1217
50 % 24 24 1248
40 % 24 24 1302
30 % 24 24 1331

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures