Sequence Similarity Clusters for the Entities in PDB 2HZQ

Entity #1 | Chains: A
Apolipoprotein D protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48035
95 % 1 2 32639 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 38733
70 % 1 2 33069
50 % 1 2 29834
40 % 1 5 7156
30 % 1 5 6818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2HZQ 1 A Apolipoprotein D 9606
2 2HZR 1 A Apolipoprotein D 9606
3 5EZ2 1 A, B Sandercyanin Fluorescent Protein 283036
4 5F6Z 1 A, B, C, D Sandercyanin Fluorescent Protein 283036
5 5F1E 1 A, B Sandercyanin Fluorescent Protein 283036