Sequence Similarity Clusters for the Entities in PDB 2IH2

Entity #1 | Chains: B,E
5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,F
5'-D(*GP*AP*CP*AP*(5PY)P*CP*GP*(6MA)P*AP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,D
Modification methylase TaqI protein, length: 421 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 5106
95 % 1 12 3584 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 1 12 3656
70 % 1 12 3490
50 % 1 12 3587
40 % 1 12 3435
30 % 1 12 3490

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2IH2 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
2 2IBT 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
3 2IH5 3 A Modification methylase TaqI 271 2.1.1.72 | Details
4 2NP7 3 A Modification methylase TaqI 271 2.1.1.72 | Details
5 2JG3 1 A, D MODIFICATION METHYLASE TAQI ADENINE-SPECIFIC METHYLTRANSFERASE TAQI, M. TAQI 271 2.1.1.72 | Details
6 1G38 3 A, D MODIFICATION METHYLASE TAQI RESIDUES 21 - 413 271 2.1.1.72 | Details
7 2IH4 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
8 2NP6 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
9 2IBS 3 A, D Modification methylase TaqI 271 2.1.1.72 | Details
10 1AQJ 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI 271 2.1.1.72 | Details
11 2ADM 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI S-ADENOSYL-METHIONINE AS LIGAND 271 2.1.1.72 | Details
12 1AQI 1 A, B ADENINE-N6-DNA-METHYLTRANSFERASE TAQI 271 2.1.1.72 | Details