Sequence Similarity Clusters for the Entities in PDB 2PCP

Entity #1 | Chains: A,C
IMMUNOGLOBULIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51230
95 % 71 163 170 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 76 173 158
70 % 761 2391 2
50 % 969 3030 2
40 % 969 3030 2
30 % 1985 6153 1
Entity #2 | Chains: B,D
IMMUNOGLOBULIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51231
95 % 1 1 34608 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 2 6 9244
70 % 943 2928 1
50 % 1003 3079 1
40 % 1003 3079 1
30 % 1986 6153 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures