Sequence Similarity Clusters for the Entities in PDB 2PCP

Entity #1 | Chains: A,C
IMMUNOGLOBULIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57359
95 % 70 161 156 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 75 171 153
70 % 746 2330 2
50 % 952 2959 2
40 % 952 2959 2
30 % 1947 6005 1
Entity #2 | Chains: B,D
IMMUNOGLOBULIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43014
95 % 1 1 33857 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 2 6 9056
70 % 927 2860 1
50 % 983 3004 1
40 % 983 3004 1
30 % 1948 6005 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures