3C29

Cre-loxP Synaptic structure


Sequence Similarity Clusters for the Entities in PDB 3C29

Entity #1 | Chains: A,B,G,H
Recombinase cre protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 12 1633
95 % 3 24 1128
90 % 3 24 1170
70 % 3 24 1212
50 % 3 24 1246
40 % 3 24 1280
30 % 3 24 1323
Entity #2 | Chains: C
LoxP DNA, chain C, dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D,F
LoxP DNA, chain D,F dna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: E
LoxP DNA, chain E dna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures