Sequence Similarity Clusters for the Entities in PDB 3DDC

Entity #1 | Chains: A
GTPase HRas protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68004
95 % 90 189 212 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.8
PDBFlex
90 % 174 354 39
70 % 175 356 47
50 % 192 401 63
40 % 192 401 83
30 % 243 657 19
Entity #2 | Chains: B
Ras association domain-containing family protein 5 protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68006
95 % 1 1 54653
90 % 1 1 51553
70 % 1 1 45061
50 % 1 1 38939
40 % 1 1 35180
30 % 1 1 31061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures