Sequence Similarity Clusters for the Entities in PDB 3GN8

Entity #1 | Chains: A,B
Glucocorticoid receptor 2 protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 11178
95 % 4 5 11093 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 5 10849
70 % 4 5 10500
50 % 43 59 642
40 % 43 59 674
30 % 43 59 707
Entity #2 | Chains: C,E
Nuclear receptor coactivator 2 protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21961
95 % 1 2 21148
90 % 1 2 20599
70 % 1 2 19029
50 % 1 2 16965
40 % 1 2 15650
30 % 1 2 14131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures