Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 151 153 43
95 % 206 245 13
90 % 207 246 15
70 % 217 256 21
50 % 217 256 45
40 % 434 512 8
30 % 442 520 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 74
95 % 204 242 14
90 % 211 249 13
70 % 218 256 20
50 % 218 256 43
40 % 435 512 8
30 % 443 520 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15340
95 % 3 3 13063
90 % 3 3 14227
70 % 3 3 13677
50 % 3 3 12268
40 % 3 3 11589
30 % 3 3 9727

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures