Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 163 165 42
95 % 218 257 13
90 % 219 258 15
70 % 234 273 13
50 % 234 273 18
40 % 468 546 4
30 % 479 557 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 104 57
95 % 215 253 14
90 % 227 265 8
70 % 235 273 12
50 % 235 273 17
40 % 469 546 4
30 % 480 557 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 13820
95 % 3 3 13740
90 % 3 3 15184
70 % 3 3 14072
50 % 3 3 12808
40 % 3 3 12094
30 % 3 3 10953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 5YL2 1 A, C Tubulin alpha-1B chain 9823
36 4O4L 1 A, C Tubulin alpha-1B chain 9913
37 5LXS 1 A, C Tubulin alpha-1B chain 9913
38 5JQG 1 A, C Tubulin alpha-1B chain 9823
39 5JH7 1 A, C Tubulin alpha-1B chain 9913
40 5J2T 1 A, C Tubulin alpha-1B chain 9913
41 5XKG 1 A, C Tubulin alpha-1B chain 9823
42 5JCB 1 A, C Tubulin alpha-1B chain 9823
43 4O2B 1 A, C Tubulin alpha-1B chain 9913
44 4O4J 1 A, C Tubulin alpha-1B chain 9913
45 5MF4 1 A, C Tubulin alpha-1B chain 9913
46 3RYI 1 A, C Tubulin alpha chain 9940
47 5CB4 1 A, C Tubulin alpha 41807
48 5JVD 1 A, C Tubulin alpha-1B chain 9913
49 5XKH 1 A, C Tubulin alpha-1B chain 9823
50 6FII 1 A, C Tubulin alpha-1B chain 9913
51 6O5M 1 A, C Tubulin alpha-1B chain 9823
52 5XP3 1 A, C Tubulin alpha-1B chain 9823
53 4I50 1 A, C Tubulin alpha-1B chain 9913
54 6BR1 1 A, C Tubulin alpha-1B chain 9823
55 6QQN 1 A, C Tubulin alpha-1B chain 9913
56 3RYF 1 A, C Tubulin alpha chain 9940
57 4O4I 1 A, C Tubulin alpha-1B chain 9913
58 5LOV 1 A, C Tubulin alpha-1B chain 9913
59 5LYJ 1 A, C Tubulin alpha-1B chain 9913
60 5OV7 1 A, C Tubulin alpha-1B chain 9913
61 6NNG 1 A, C Tubulin alpha-1B chain 9823
62 5CA1 1 A, C Tubulin alpha 41807
63 4ZOL 1 A, C Tubulin alpha-1B chain 9823
64 5XLZ 1 A, C Tubulin alpha-1B chain 9913
65 6HX8 1 A, C Tubulin alpha-1B chain 9913
66 6GJ4 1 A, C Tubulin alpha-1B chain 9913
67 6GF3 1 A, C Tubulin alpha-1B chain 9913
68 4ZI7 1 A, C Tubulin alpha-1B chain 9823
69 6FJF 1 A, C Tubulin alpha-1B chain 9913
70 5BMV 1 A, C Tubulin alpha-1B chain 9913
71 6BRF 1 A, C Tubulin alpha-1B chain 9823
72 6EG5 1 A, C Tubulin alpha-1B chain 9823
73 6GWC 1 A ALPHA-TUBULIN 9940
74 4O2A 1 A, C Tubulin alpha-1B chain 9913
75 4F6R 1 A Tubulin alpha chain 9940
76 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
77 5CA0 1 A, C Tubulin alpha-1B chain 9823
78 5NJH 1 A, C Tubulin alpha-1B chain 9913
79 5O7A 1 A, C Tubulin alpha-1B chain 9913
80 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
81 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
82 6BS2 1 A, C Tubulin alpha-1B chain 9823
83 4YJ2 1 A, C Tubulin alpha-1B chain 9913
84 3RYH 1 A, C Tubulin alpha chain 9940
85 6GZE 1 A, C Tubulin alpha-1B chain 9913
86 4IIJ 1 A, C Tubulin alpha-1B chain 9913
87 5XAF 1 A, C Tubulin alpha-1B chain 9913
88 5J2U 1 A, C Tubulin alpha-1B chain 9913
89 6KNZ 1 A, C Tubulin alpha-1B chain 9913
90 5YZ3 1 A, C Tubulin alpha-1B chain 9913
91 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
92 6N47 1 A, C Tubulin alpha-1B chain 9823
93 3UT5 1 A, C Tubulin alpha chain 9940
94 6O61 1 A, C Tubulin alpha-1B chain 9823
95 5XAG 1 A, C Tubulin alpha-1B chain 9913
96 6GVN 1 A Tubulin alpha chain 9940
97 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
98 6BRY 1 A, C Tubulin alpha-1B chain 9823
99 6K9V 1 A, C Tubulin alpha-1B chain 9913
100 6I5C 1 A, C Tubulin alpha-1B chain 9913
101 5XKE 1 A, C Tubulin alpha-1B chain 9823
102 5C8Y 1 A, C Tubulin alpha 41807
103 5YL4 1 A, C Tubulin alpha chain 41807
104 6JCJ 1 A, C Tubulin alpha-1B chain 9823
105 6D88 1 A, C Tubulin alpha-1B chain 9823
106 5YLJ 1 A, C Tubulin alpha-1B chain 9823
107 5XLT 1 A, C Tubulin alpha-1B chain 9913
108 5ZXH 1 A, C Tubulin alpha-1B chain 9823
109 5XKF 1 A, C Tubulin alpha-1B chain 9823
110 6AGK 1 A, C Tubulin alpha-1B chain 9823
111 5H7O 1 A, C Tubulin alpha-1B chain 9823
112 5XIW 1 A, C Tubulin alpha-1B chain 9823
113 6GX7 1 A, C Tubulin alpha chain 9940
114 4HNA 1 A Tubulin alpha chain 9940
115 5XHC 1 A, C Tubulin alpha chain 41807
116 6O5N 1 A, C Tubulin alpha-1B chain 9823
117 5XI5 1 A, C Tubulin alpha chain 41807
118 5Z4U 1 A, C Tubulin alpha-1B chain 9823
119 5YLS 1 A, C Tubulin alpha-1B chain 9823
120 5XI7 1 A, C Tubulin alpha chain 41807
121 5MIO 1 A Tubulin alpha-1B chain 9913
122 6GWD 1 A, C, E ALPHA-TUBULIN 9940
123 4EB6 1 A, C Tubulin alpha chain 9940
124 5LP6 1 A, C Tubulin alpha-1B chain 9913
125 6BBN 1 A, C Tubulin alpha-1B chain 9913
126 6GVM 1 A Tubulin alpha chain 9940
127 4YJ3 1 A, C Tubulin alpha-1B chain 9913
128 4F61 1 A, C, E, G Tubulin alpha chain 9940
129 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
130 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
131 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
132 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
133 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
134 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
135 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
136 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
137 6I2I 1 A Tubulin alpha-1B chain 9606
138 6E7B 2 A Tubulin alpha-1B chain 9606
139 6E7C 2 A Tubulin alpha-1B chain 9606
140 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
141 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
142 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
143 6CVJ 1 A Tubulin alpha-1B chain 9823
144 6CVN 2 B Tubulin alpha-1B chain 9823
145 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
146 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
147 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
148 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
149 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
150 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
151 6B0C 1 A, C Tubulin alpha-1B chain 9823
152 6B0I 1 A Tubulin alpha-1B chain 9823
153 6B0L 1 A Tubulin alpha-1B chain 9823
154 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
155 5KMG 1 A Tubulin alpha-1B chain 9823
156 5IJ0 1 A Tubulin alpha-1B chain 9606
157 5IJ9 1 A Tubulin alpha-1B chain 9606
158 3JAW 1 A, C Tubulin alpha-1B chain 9823
159 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
160 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
161 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
162 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
163 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
164 3J8X 2 A Tubulin alpha-1B chain 9823
165 3J8Y 2 A Tubulin alpha-1B chain 9823