Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 156 42
95 % 209 248 12
90 % 210 249 15
70 % 224 263 21
50 % 224 263 43
40 % 448 526 8
30 % 456 534 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 57 109
95 % 207 245 13
90 % 217 255 13
70 % 225 263 20
50 % 225 263 41
40 % 449 526 8
30 % 457 534 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 13659
95 % 3 3 15134
90 % 3 3 13263
70 % 3 3 13995
50 % 3 3 12707
40 % 3 3 11714
30 % 3 3 10863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5IYZ 1 A, C Tubulin alpha-1B chain 9913
2 4I4T 1 A, C Tubulin alpha-1B chain 9913
3 5NQU 1 A Tubulin alpha-1B chain 9913
4 5LXT 1 A, C Tubulin alpha-1B chain 9913
5 5EYP 1 A Tubulin alpha chain 9940
6 6QTN 1 A, C Tubulin alpha-1B chain 9913
7 4IHJ 1 A, C Tubulin alpha-1B chain 9913
8 4TV9 1 A, C Tubulin alpha-1B chain 9913
9 5M7E 1 A, C Tubulin alpha-1B chain 9913
10 3RYC 1 A, C Tubulin alpha chain 9940
11 5EZY 1 A, C Tubulin alpha-1B chain 9823
12 4LNU 1 A Tubulin alpha chain 9940
13 5EIB 1 C Tubulin alpha-1B chain 9913
14 6FKL 1 A, C Tubulin alpha-1B chain 9913
15 6FJM 1 A, C Tubulin alpha-1B chain 9913
16 5M8G 1 A, C Tubulin alpha-1B chain 9913
17 5NM5 1 A Tubulin alpha-1B chain 9913
18 5NFZ 1 A, C Tubulin alpha-1B chain 9913
19 4TUY 1 A, C Tubulin alpha-1B chain 9913
20 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
21 6FKJ 1 A, C Tubulin alpha-1B chain 9913
22 5LA6 1 A, C Tubulin alpha-1B chain 9913
23 6F7C 1 A, C Tubulin alpha-1B chain 9913
24 4I55 1 A, C Tubulin alpha-1B chain 9913
25 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
26 5NQT 1 A Tubulin alpha-1B chain 9913
27 4O4H 1 A, C Tubulin alpha-1B chain 9913
28 5NG1 1 A, C Tubulin alpha-1B chain 9913
29 5OSK 1 A, C Tubulin alpha-1B chain 9913
30 5ITZ 1 A Tubulin alpha-1B chain 9913
31 5M8D 1 A, C Tubulin alpha-1B chain 9913
32 5M7G 1 A, C Tubulin alpha-1B chain 9913
33 5YL2 1 A, C Tubulin alpha-1B chain 9823
34 4O4L 1 A, C Tubulin alpha-1B chain 9913
35 5LXS 1 A, C Tubulin alpha-1B chain 9913
36 5JQG 1 A, C Tubulin alpha-1B chain 9823
37 5JH7 1 A, C Tubulin alpha-1B chain 9913
38 5J2T 1 A, C Tubulin alpha-1B chain 9913
39 5XKG 1 A, C Tubulin alpha-1B chain 9823
40 5JCB 1 A, C Tubulin alpha-1B chain 9823
41 4O2B 1 A, C Tubulin alpha-1B chain 9913
42 4O4J 1 A, C Tubulin alpha-1B chain 9913
43 5MF4 1 A, C Tubulin alpha-1B chain 9913
44 3RYI 1 A, C Tubulin alpha chain 9940
45 5CB4 1 A, C Tubulin alpha 41807
46 5JVD 1 A, C Tubulin alpha-1B chain 9913
47 5XKH 1 A, C Tubulin alpha-1B chain 9823
48 6FII 1 A, C Tubulin alpha-1B chain 9913
49 6O5M 1 A, C Tubulin alpha-1B chain 9823
50 5XP3 1 A, C Tubulin alpha-1B chain 9823
51 4I50 1 A, C Tubulin alpha-1B chain 9913
52 6BR1 1 A, C Tubulin alpha-1B chain 9823
53 6QQN 1 A, C Tubulin alpha-1B chain 9913
54 3RYF 1 A, C Tubulin alpha chain 9940
55 4O4I 1 A, C Tubulin alpha-1B chain 9913
56 5LOV 1 A, C Tubulin alpha-1B chain 9913
57 5LYJ 1 A, C Tubulin alpha-1B chain 9913
58 5OV7 1 A, C Tubulin alpha-1B chain 9913
59 6NNG 1 A, C Tubulin alpha-1B chain 9823
60 5CA1 1 A, C Tubulin alpha 41807
61 4ZOL 1 A, C Tubulin alpha-1B chain 9823
62 5XLZ 1 A, C Tubulin alpha-1B chain 9913
63 6HX8 1 A, C Tubulin alpha-1B chain 9913
64 6GJ4 1 A, C Tubulin alpha-1B chain 9913
65 6GF3 1 A, C Tubulin alpha-1B chain 9913
66 4ZI7 1 A, C Tubulin alpha-1B chain 9823
67 6FJF 1 A, C Tubulin alpha-1B chain 9913
68 5BMV 1 A, C Tubulin alpha-1B chain 9913
69 6BRF 1 A, C Tubulin alpha-1B chain 9823
70 6EG5 1 A, C Tubulin alpha-1B chain 9823
71 6GWC 1 A ALPHA-TUBULIN 9940
72 4O2A 1 A, C Tubulin alpha-1B chain 9913
73 4F6R 1 A Tubulin alpha chain 9940
74 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
75 5CA0 1 A, C Tubulin alpha-1B chain 9823
76 5NJH 1 A, C Tubulin alpha-1B chain 9913
77 5O7A 1 A, C Tubulin alpha-1B chain 9913
78 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
79 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
80 6BS2 1 A, C Tubulin alpha-1B chain 9823
81 4YJ2 1 A, C Tubulin alpha-1B chain 9913
82 3RYH 1 A, C Tubulin alpha chain 9940
83 4IIJ 1 A, C Tubulin alpha-1B chain 9913
84 5XAF 1 A, C Tubulin alpha-1B chain 9913
85 5J2U 1 A, C Tubulin alpha-1B chain 9913
86 5YZ3 1 A, C Tubulin alpha-1B chain 9913
87 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
88 3UT5 1 A, C Tubulin alpha chain 9940
89 6O61 1 A, C Tubulin alpha-1B chain 9823
90 5XAG 1 A, C Tubulin alpha-1B chain 9913
91 6GVN 1 A Tubulin alpha chain 9940
92 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
93 6BRY 1 A, C Tubulin alpha-1B chain 9823
94 6K9V 1 A, C Tubulin alpha-1B chain 9913
95 6I5C 1 A, C Tubulin alpha-1B chain 9913
96 5XKE 1 A, C Tubulin alpha-1B chain 9823
97 5C8Y 1 A, C Tubulin alpha 41807
98 5YL4 1 A, C Tubulin alpha chain 41807
99 6JCJ 1 A, C Tubulin alpha-1B chain 9823
100 6D88 1 A, C Tubulin alpha-1B chain 9823
101 5YLJ 1 A, C Tubulin alpha-1B chain 9823
102 5XLT 1 A, C Tubulin alpha-1B chain 9913
103 5ZXH 1 A, C Tubulin alpha-1B chain 9823
104 5XKF 1 A, C Tubulin alpha-1B chain 9823
105 6AGK 1 A, C Tubulin alpha-1B chain 9823
106 5H7O 1 A, C Tubulin alpha-1B chain 9823
107 5XIW 1 A, C Tubulin alpha-1B chain 9823
108 6GX7 1 A, C Tubulin alpha chain 9940
109 4HNA 1 A Tubulin alpha chain 9940
110 5XHC 1 A, C Tubulin alpha chain 41807
111 6O5N 1 A, C Tubulin alpha-1B chain 9823
112 5XI5 1 A, C Tubulin alpha chain 41807
113 5Z4U 1 A, C Tubulin alpha-1B chain 9823
114 5YLS 1 A, C Tubulin alpha-1B chain 9823
115 5XI7 1 A, C Tubulin alpha chain 41807
116 5MIO 1 A Tubulin alpha-1B chain 9913
117 6GWD 1 A, C, E ALPHA-TUBULIN 9940
118 4EB6 1 A, C Tubulin alpha chain 9940
119 5LP6 1 A, C Tubulin alpha-1B chain 9913
120 6BBN 1 A, C Tubulin alpha-1B chain 9913
121 6GVM 1 A Tubulin alpha chain 9940
122 4YJ3 1 A, C Tubulin alpha-1B chain 9913
123 4F61 1 A, C, E, G Tubulin alpha chain 9940
124 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
125 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
126 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
127 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
128 6I2I 1 A Tubulin alpha-1B chain 9606
129 6E7B 2 A Tubulin alpha-1B chain 9606
130 6E7C 2 A Tubulin alpha-1B chain 9606
131 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
132 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
133 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
134 6CVJ 1 A Tubulin alpha-1B chain 9823
135 6CVN 2 B Tubulin alpha-1B chain 9823
136 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
137 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
138 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
139 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
140 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
141 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
142 6B0C 1 A, C Tubulin alpha-1B chain 9823
143 6B0I 1 A Tubulin alpha-1B chain 9823
144 6B0L 1 A Tubulin alpha-1B chain 9823
145 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
146 5KMG 1 A Tubulin alpha-1B chain 9823
147 5IJ0 1 A Tubulin alpha-1B chain 9606
148 5IJ9 1 A Tubulin alpha-1B chain 9606
149 3JAW 1 A, C Tubulin alpha-1B chain 9823
150 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
151 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
152 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
153 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
154 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
155 3J8X 2 A Tubulin alpha-1B chain 9823
156 3J8Y 2 A Tubulin alpha-1B chain 9823