3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 173 175 42
95 % 234 273 13
90 % 237 276 13
70 % 253 292 14
50 % 253 292 19
40 % 506 584 4
30 % 517 595 7
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 56
95 % 233 271 14
90 % 246 284 7
70 % 254 292 13
50 % 254 292 18
40 % 507 584 4
30 % 518 595 7
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14854
95 % 3 3 15101
90 % 3 3 14856
70 % 3 3 14032
50 % 3 3 12768
40 % 3 3 11923
30 % 3 3 10951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 5YL2 1 A, C Tubulin alpha-1B chain 9823
36 4O4L 1 A, C Tubulin alpha-1B chain 9913
37 5LXS 1 A, C Tubulin alpha-1B chain 9913
38 5JQG 1 A, C Tubulin alpha-1B chain 9823
39 5JH7 1 A, C Tubulin alpha-1B chain 9913
40 5J2T 1 A, C Tubulin alpha-1B chain 9913
41 5XKG 1 A, C Tubulin alpha-1B chain 9823
42 5JCB 1 A, C Tubulin alpha-1B chain 9823
43 4O2B 1 A, C Tubulin alpha-1B chain 9913
44 4O4J 1 A, C Tubulin alpha-1B chain 9913
45 5MF4 1 A, C Tubulin alpha-1B chain 9913
46 3RYI 1 A, C Tubulin alpha chain 9940
47 5CB4 1 A, C Tubulin alpha 41807
48 5JVD 1 A, C Tubulin alpha-1B chain 9913
49 5XKH 1 A, C Tubulin alpha-1B chain 9823
50 6FII 1 A, C Tubulin alpha-1B chain 9913
51 6O5M 1 A, C Tubulin alpha-1B chain 9823
52 5XP3 1 A, C Tubulin alpha-1B chain 9823
53 4I50 1 A, C Tubulin alpha-1B chain 9913
54 6S9E 1 A, C Tubulin alpha-1B chain 9913
55 6BR1 1 A, C Tubulin alpha-1B chain 9823
56 6QQN 1 A, C Tubulin alpha-1B chain 9913
57 3RYF 1 A, C Tubulin alpha chain 9940
58 4O4I 1 A, C Tubulin alpha-1B chain 9913
59 5LOV 1 A, C Tubulin alpha-1B chain 9913
60 5LYJ 1 A, C Tubulin alpha-1B chain 9913
61 5OV7 1 A, C Tubulin alpha-1B chain 9913
62 6NNG 1 A, C Tubulin alpha-1B chain 9823
63 5CA1 1 A, C Tubulin alpha 41807
64 4ZOL 1 A, C Tubulin alpha-1B chain 9823
65 5XLZ 1 A, C Tubulin alpha-1B chain 9913
66 6HX8 1 A, C Tubulin alpha-1B chain 9913
67 6GJ4 1 A, C Tubulin alpha-1B chain 9913
68 6GF3 1 A, C Tubulin alpha-1B chain 9913
69 4ZI7 1 A, C Tubulin alpha-1B chain 9823
70 6FJF 1 A, C Tubulin alpha-1B chain 9913
71 5BMV 1 A, C Tubulin alpha-1B chain 9913
72 6BRF 1 A, C Tubulin alpha-1B chain 9823
73 6EG5 1 A, C Tubulin alpha-1B chain 9823
74 6GWC 1 A ALPHA-TUBULIN 9940
75 4O2A 1 A, C Tubulin alpha-1B chain 9913
76 4F6R 1 A Tubulin alpha chain 9940
77 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
78 5CA0 1 A, C Tubulin alpha-1B chain 9823
79 5NJH 1 A, C Tubulin alpha-1B chain 9913
80 5O7A 1 A, C Tubulin alpha-1B chain 9913
81 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
82 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
83 6BS2 1 A, C Tubulin alpha-1B chain 9823
84 6PC4 1 A, C Tubulin alpha-1B chain 9823
85 4YJ2 1 A, C Tubulin alpha-1B chain 9913
86 3RYH 1 A, C Tubulin alpha chain 9940
87 6GZE 1 A, C Tubulin alpha-1B chain 9913
88 4IIJ 1 A, C Tubulin alpha-1B chain 9913
89 5XAF 1 A, C Tubulin alpha-1B chain 9913
90 5J2U 1 A, C Tubulin alpha-1B chain 9913
91 6KNZ 1 A, C Tubulin alpha-1B chain 9913
92 5YZ3 1 A, C Tubulin alpha-1B chain 9913
93 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
94 6N47 1 A, C Tubulin alpha-1B chain 9823
95 3UT5 1 A, C Tubulin alpha chain 9940
96 6O61 1 A, C Tubulin alpha-1B chain 9823
97 5XAG 1 A, C Tubulin alpha-1B chain 9913
98 6GVN 1 A Tubulin alpha chain 9940
99 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
100 6BRY 1 A, C Tubulin alpha-1B chain 9823
101 6K9V 1 A, C Tubulin alpha-1B chain 9913
102 6I5C 1 A, C Tubulin alpha-1B chain 9913
103 5XKE 1 A, C Tubulin alpha-1B chain 9823
104 5C8Y 1 A, C Tubulin alpha 41807
105 5YL4 1 A, C Tubulin alpha chain 41807
106 6JCJ 1 A, C Tubulin alpha-1B chain 9823
107 6D88 1 A, C Tubulin alpha-1B chain 9823
108 5YLJ 1 A, C Tubulin alpha-1B chain 9823
109 5XLT 1 A, C Tubulin alpha-1B chain 9913
110 5ZXH 1 A, C Tubulin alpha-1B chain 9823
111 5XKF 1 A, C Tubulin alpha-1B chain 9823
112 6AGK 1 A, C Tubulin alpha-1B chain 9823
113 5H7O 1 A, C Tubulin alpha-1B chain 9823
114 5XIW 1 A, C Tubulin alpha-1B chain 9823
115 6GX7 1 A, C Tubulin alpha chain 9940
116 4HNA 1 A Tubulin alpha chain 9940
117 5XHC 1 A, C Tubulin alpha chain 41807
118 6O5N 1 A, C Tubulin alpha-1B chain 9823
119 5XI5 1 A, C Tubulin alpha chain 41807
120 5Z4U 1 A, C Tubulin alpha-1B chain 9823
121 5YLS 1 A, C Tubulin alpha-1B chain 9823
122 5XI7 1 A, C Tubulin alpha chain 41807
123 5MIO 1 A Tubulin alpha-1B chain 9913
124 6GWD 1 A, C, E ALPHA-TUBULIN 9940
125 4EB6 1 A, C Tubulin alpha chain 9940
126 5LP6 1 A, C Tubulin alpha-1B chain 9913
127 6BBN 1 A, C Tubulin alpha-1B chain 9913
128 6GVM 1 A Tubulin alpha chain 9940
129 4YJ3 1 A, C Tubulin alpha-1B chain 9913
130 4F61 1 A, C, E, G Tubulin alpha chain 9940
131 6WVL 1 A, C Tubulin alpha-1B chain 9913
132 6WVM 1 A, C Tubulin alpha-1B chain 9913
133 6WVR 1 A, C Tubulin alpha-1B chain 9913
134 6TIW 3 A Tubulin alpha-1B chain 9823
135 6TA3 2 A Tubulin alpha-1B chain 9823
136 6TA4 2 A Tubulin alpha-1B chain 9823
137 6SES 1 A, C Tubulin alpha-1B chain 9913
138 6OJQ 2 A Tubulin alpha-1B chain 9913
139 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
140 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
141 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
142 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
143 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
144 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
145 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
146 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
147 6I2I 1 A Tubulin alpha-1B chain 9606
148 6E7B 2 A Tubulin alpha-1B chain 9606
149 6E7C 2 A Tubulin alpha-1B chain 9606
150 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
151 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
152 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
153 6CVJ 1 A Tubulin alpha-1B chain 9823
154 6CVN 2 B Tubulin alpha-1B chain 9823
155 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
156 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
157 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
158 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
159 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
160 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
161 6B0C 1 A, C Tubulin alpha-1B chain 9823
162 6B0I 1 A Tubulin alpha-1B chain 9823
163 6B0L 1 A Tubulin alpha-1B chain 9823
164 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
165 5KMG 1 A Tubulin alpha-1B chain 9823
166 5IJ0 1 A Tubulin alpha-1B chain 9606
167 5IJ9 1 A Tubulin alpha-1B chain 9606
168 3JAW 1 A, C Tubulin alpha-1B chain 9823
169 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
170 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
171 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
172 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
173 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
174 3J8X 2 A Tubulin alpha-1B chain 9823
175 3J8Y 2 A Tubulin alpha-1B chain 9823