3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 179 40
95 % 239 278 11
90 % 242 281 14
70 % 258 297 15
50 % 258 297 18
40 % 516 594 4
30 % 527 605 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 58
95 % 237 275 13
90 % 250 288 9
70 % 259 297 14
50 % 259 297 17
40 % 517 594 4
30 % 528 605 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18199
95 % 3 3 16401
90 % 3 3 16079
70 % 3 3 13725
50 % 3 3 12527
40 % 3 3 11729
30 % 3 3 11765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 6Y6D 1 A, C Tubulin alpha-1B chain 9913
36 5YL2 1 A, C Tubulin alpha-1B chain 9823
37 4O4L 1 A, C Tubulin alpha-1B chain 9913
38 5LXS 1 A, C Tubulin alpha-1B chain 9913
39 5JQG 1 A, C Tubulin alpha-1B chain 9823
40 5JH7 1 A, C Tubulin alpha-1B chain 9913
41 5J2T 1 A, C Tubulin alpha-1B chain 9913
42 5XKG 1 A, C Tubulin alpha-1B chain 9823
43 5JCB 1 A, C Tubulin alpha-1B chain 9823
44 4O2B 1 A, C Tubulin alpha-1B chain 9913
45 4O4J 1 A, C Tubulin alpha-1B chain 9913
46 5MF4 1 A, C Tubulin alpha-1B chain 9913
47 3RYI 1 A, C Tubulin alpha chain 9940
48 5CB4 1 A, C Tubulin alpha 41807
49 5JVD 1 A, C Tubulin alpha-1B chain 9913
50 5XKH 1 A, C Tubulin alpha-1B chain 9823
51 6FII 1 A, C Tubulin alpha-1B chain 9913
52 6O5M 1 A, C Tubulin alpha-1B chain 9823
53 5XP3 1 A, C Tubulin alpha-1B chain 9823
54 4I50 1 A, C Tubulin alpha-1B chain 9913
55 6S9E 1 A, C Tubulin alpha-1B chain 9913
56 6TDE 1 A, C Tubulin alpha chain 9940
57 6BR1 1 A, C Tubulin alpha-1B chain 9823
58 6QQN 1 A, C Tubulin alpha-1B chain 9913
59 3RYF 1 A, C Tubulin alpha chain 9940
60 4O4I 1 A, C Tubulin alpha-1B chain 9913
61 5LOV 1 A, C Tubulin alpha-1B chain 9913
62 5LYJ 1 A, C Tubulin alpha-1B chain 9913
63 5OV7 1 A, C Tubulin alpha-1B chain 9913
64 6NNG 1 A, C Tubulin alpha-1B chain 9823
65 5CA1 1 A, C Tubulin alpha 41807
66 4ZOL 1 A, C Tubulin alpha-1B chain 9823
67 5XLZ 1 A, C Tubulin alpha-1B chain 9913
68 6HX8 1 A, C Tubulin alpha-1B chain 9913
69 6GJ4 1 A, C Tubulin alpha-1B chain 9913
70 6GF3 1 A, C Tubulin alpha-1B chain 9913
71 4ZI7 1 A, C Tubulin alpha-1B chain 9823
72 6FJF 1 A, C Tubulin alpha-1B chain 9913
73 5BMV 1 A, C Tubulin alpha-1B chain 9913
74 6BRF 1 A, C Tubulin alpha-1B chain 9823
75 6EG5 1 A, C Tubulin alpha-1B chain 9823
76 6GWC 1 A ALPHA-TUBULIN 9940
77 4O2A 1 A, C Tubulin alpha-1B chain 9913
78 4F6R 1 A Tubulin alpha chain 9940
79 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
80 5CA0 1 A, C Tubulin alpha-1B chain 9823
81 5NJH 1 A, C Tubulin alpha-1B chain 9913
82 7JFR 1 A, C Tubulin alpha-1B chain 9913
83 5O7A 1 A, C Tubulin alpha-1B chain 9913
84 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
85 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
86 6BS2 1 A, C Tubulin alpha-1B chain 9823
87 6PC4 1 A, C Tubulin alpha-1B chain 9823
88 4YJ2 1 A, C Tubulin alpha-1B chain 9913
89 3RYH 1 A, C Tubulin alpha chain 9940
90 6GZE 1 A, C Tubulin alpha-1B chain 9913
91 4IIJ 1 A, C Tubulin alpha-1B chain 9913
92 5XAF 1 A, C Tubulin alpha-1B chain 9913
93 5J2U 1 A, C Tubulin alpha-1B chain 9913
94 6KNZ 1 A, C Tubulin alpha-1B chain 9913
95 5YZ3 1 A, C Tubulin alpha-1B chain 9913
96 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
97 6N47 1 A, C Tubulin alpha-1B chain 9823
98 3UT5 1 A, C Tubulin alpha chain 9940
99 6O61 1 A, C Tubulin alpha-1B chain 9823
100 5XAG 1 A, C Tubulin alpha-1B chain 9913
101 6GVN 1 A Tubulin alpha chain 9940
102 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
103 6BRY 1 A, C Tubulin alpha-1B chain 9823
104 6K9V 1 A, C Tubulin alpha-1B chain 9913
105 6KPP 1 A, C Tubulin alpha-1B chain 9823
106 6I5C 1 A, C Tubulin alpha-1B chain 9913
107 5XKE 1 A, C Tubulin alpha-1B chain 9823
108 5C8Y 1 A, C Tubulin alpha 41807
109 5YL4 1 A, C Tubulin alpha chain 41807
110 6JCJ 1 A, C Tubulin alpha-1B chain 9823
111 6D88 1 A, C Tubulin alpha-1B chain 9823
112 5YLJ 1 A, C Tubulin alpha-1B chain 9823
113 5XLT 1 A, C Tubulin alpha-1B chain 9913
114 5ZXH 1 A, C Tubulin alpha-1B chain 9823
115 5XKF 1 A, C Tubulin alpha-1B chain 9823
116 6AGK 1 A, C Tubulin alpha-1B chain 9823
117 5H7O 1 A, C Tubulin alpha-1B chain 9823
118 5XIW 1 A, C Tubulin alpha-1B chain 9823
119 6GX7 1 A, C Tubulin alpha chain 9940
120 4HNA 1 A Tubulin alpha chain 9940
121 5XHC 1 A, C Tubulin alpha chain 41807
122 6O5N 1 A, C Tubulin alpha-1B chain 9823
123 5XI5 1 A, C Tubulin alpha chain 41807
124 5Z4U 1 A, C Tubulin alpha-1B chain 9823
125 5YLS 1 A, C Tubulin alpha-1B chain 9823
126 5XI7 1 A, C Tubulin alpha chain 41807
127 5MIO 1 A Tubulin alpha-1B chain 9913
128 6GWD 1 A, C, E ALPHA-TUBULIN 9940
129 4EB6 1 A, C Tubulin alpha chain 9940
130 5LP6 1 A, C Tubulin alpha-1B chain 9913
131 6BBN 1 A, C Tubulin alpha-1B chain 9913
132 6GVM 1 A Tubulin alpha chain 9940
133 4YJ3 1 A, C Tubulin alpha-1B chain 9913
134 4F61 1 A, C, E, G Tubulin alpha chain 9940
135 6WVL 1 A, C Tubulin alpha-1B chain 9913
136 6WVM 1 A, C Tubulin alpha-1B chain 9913
137 6WVR 1 A, C Tubulin alpha-1B chain 9913
138 6TIW 3 A Tubulin alpha-1B chain 9823
139 6TA3 2 A Tubulin alpha-1B chain 9823
140 6TA4 2 A Tubulin alpha-1B chain 9823
141 6SES 1 A, C Tubulin alpha-1B chain 9913
142 6OJQ 2 A Tubulin alpha-1B chain 9913
143 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
144 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
145 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
146 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
147 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
148 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
149 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
150 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
151 6I2I 1 A Tubulin alpha-1B chain 9606
152 6E7B 2 A Tubulin alpha-1B chain 9606
153 6E7C 2 A Tubulin alpha-1B chain 9606
154 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
155 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
156 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
157 6CVJ 1 A Tubulin alpha-1B chain 9823
158 6CVN 2 B Tubulin alpha-1B chain 9823
159 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
160 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
161 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
162 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
163 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
164 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
165 6B0C 1 A, C Tubulin alpha-1B chain 9823
166 6B0I 1 A Tubulin alpha-1B chain 9823
167 6B0L 1 A Tubulin alpha-1B chain 9823
168 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
169 5KMG 1 A Tubulin alpha-1B chain 9823
170 5IJ0 1 A Tubulin alpha-1B chain 9606
171 5IJ9 1 A Tubulin alpha-1B chain 9606
172 3JAW 1 A, C Tubulin alpha-1B chain 9823
173 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
174 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
175 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
176 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
177 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
178 3J8X 2 A Tubulin alpha-1B chain 9823
179 3J8Y 2 A Tubulin alpha-1B chain 9823