Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 163 165 42
95 % 218 257 13
90 % 219 258 15
70 % 234 273 13
50 % 234 273 18
40 % 468 546 4
30 % 479 557 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 77
95 % 215 253 14
90 % 227 265 8
70 % 235 273 12
50 % 235 273 17
40 % 469 546 4
30 % 480 557 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14885
95 % 3 3 15483
90 % 3 3 15207
70 % 3 3 14286
50 % 3 3 12997
40 % 3 3 12127
30 % 3 3 11109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 5YL2 1 A, C Tubulin alpha-1B chain 9823
36 4O4L 1 A, C Tubulin alpha-1B chain 9913
37 5LXS 1 A, C Tubulin alpha-1B chain 9913
38 5JQG 1 A, C Tubulin alpha-1B chain 9823
39 5JH7 1 A, C Tubulin alpha-1B chain 9913
40 5J2T 1 A, C Tubulin alpha-1B chain 9913
41 5XKG 1 A, C Tubulin alpha-1B chain 9823
42 5JCB 1 A, C Tubulin alpha-1B chain 9823
43 4O2B 1 A, C Tubulin alpha-1B chain 9913
44 4O4J 1 A, C Tubulin alpha-1B chain 9913
45 5MF4 1 A, C Tubulin alpha-1B chain 9913
46 3RYI 1 A, C Tubulin alpha chain 9940
47 5CB4 1 A, C Tubulin alpha 41807
48 5JVD 1 A, C Tubulin alpha-1B chain 9913
49 5XKH 1 A, C Tubulin alpha-1B chain 9823
50 6FII 1 A, C Tubulin alpha-1B chain 9913
51 6O5M 1 A, C Tubulin alpha-1B chain 9823
52 5XP3 1 A, C Tubulin alpha-1B chain 9823
53 4I50 1 A, C Tubulin alpha-1B chain 9913
54 6BR1 1 A, C Tubulin alpha-1B chain 9823
55 6QQN 1 A, C Tubulin alpha-1B chain 9913
56 3RYF 1 A, C Tubulin alpha chain 9940
57 4O4I 1 A, C Tubulin alpha-1B chain 9913
58 5LOV 1 A, C Tubulin alpha-1B chain 9913
59 5LYJ 1 A, C Tubulin alpha-1B chain 9913
60 5OV7 1 A, C Tubulin alpha-1B chain 9913
61 6NNG 1 A, C Tubulin alpha-1B chain 9823
62 5CA1 1 A, C Tubulin alpha 41807
63 4ZOL 1 A, C Tubulin alpha-1B chain 9823
64 5XLZ 1 A, C Tubulin alpha-1B chain 9913
65 6HX8 1 A, C Tubulin alpha-1B chain 9913
66 6GJ4 1 A, C Tubulin alpha-1B chain 9913
67 6GF3 1 A, C Tubulin alpha-1B chain 9913
68 4ZI7 1 A, C Tubulin alpha-1B chain 9823
69 6FJF 1 A, C Tubulin alpha-1B chain 9913
70 5BMV 1 A, C Tubulin alpha-1B chain 9913
71 6BRF 1 A, C Tubulin alpha-1B chain 9823
72 6EG5 1 A, C Tubulin alpha-1B chain 9823
73 6GWC 1 A ALPHA-TUBULIN 9940
74 4O2A 1 A, C Tubulin alpha-1B chain 9913
75 4F6R 1 A Tubulin alpha chain 9940
76 5KX5 1 A, C Tubulin alpha chain 9940
77 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
78 5CA0 1 A, C Tubulin alpha-1B chain 9823
79 5NJH 1 A, C Tubulin alpha-1B chain 9913
80 5O7A 1 A, C Tubulin alpha-1B chain 9913
81 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
82 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
83 6BS2 1 A, C Tubulin alpha-1B chain 9823
84 4YJ2 1 A, C Tubulin alpha-1B chain 9913
85 6H9B 1 A, C Tubulin alpha chain 9940
86 3RYH 1 A, C Tubulin alpha chain 9940
87 6GZE 1 A, C Tubulin alpha-1B chain 9913
88 4IIJ 1 A, C Tubulin alpha-1B chain 9913
89 5XAF 1 A, C Tubulin alpha-1B chain 9913
90 5J2U 1 A, C Tubulin alpha-1B chain 9913
91 6KNZ 1 A, C Tubulin alpha-1B chain 9913
92 5YZ3 1 A, C Tubulin alpha-1B chain 9913
93 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
94 6N47 1 A, C Tubulin alpha-1B chain 9823
95 3UT5 1 A, C Tubulin alpha chain 9940
96 6O61 1 A, C Tubulin alpha-1B chain 9823
97 5XAG 1 A, C Tubulin alpha-1B chain 9913
98 6GVN 1 A Tubulin alpha chain 9940
99 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
100 6BRY 1 A, C Tubulin alpha-1B chain 9823
101 6K9V 1 A, C Tubulin alpha-1B chain 9913
102 6I5C 1 A, C Tubulin alpha-1B chain 9913
103 5XKE 1 A, C Tubulin alpha-1B chain 9823
104 5C8Y 1 A, C Tubulin alpha 41807
105 5YL4 1 A, C Tubulin alpha chain 41807
106 6JCJ 1 A, C Tubulin alpha-1B chain 9823
107 6D88 1 A, C Tubulin alpha-1B chain 9823
108 5YLJ 1 A, C Tubulin alpha-1B chain 9823
109 5XLT 1 A, C Tubulin alpha-1B chain 9913
110 5ZXH 1 A, C Tubulin alpha-1B chain 9823
111 5XKF 1 A, C Tubulin alpha-1B chain 9823
112 6AGK 1 A, C Tubulin alpha-1B chain 9823
113 5H7O 1 A, C Tubulin alpha-1B chain 9823
114 5XIW 1 A, C Tubulin alpha-1B chain 9823
115 6GX7 1 A, C Tubulin alpha chain 9940
116 4FFB 1 A Tubulin alpha-1 chain 4932
117 4U3J 1 A Tubulin alpha-1 chain 4932
118 4HNA 1 A Tubulin alpha chain 9940
119 5XHC 1 A, C Tubulin alpha chain 41807
120 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
121 6O5N 1 A, C Tubulin alpha-1B chain 9823
122 4X1I 1 A, C Tubulin alpha chain 9940
123 5XI5 1 A, C Tubulin alpha chain 41807
124 5Z4U 1 A, C Tubulin alpha-1B chain 9823
125 5YLS 1 A, C Tubulin alpha-1B chain 9823
126 4X1Y 1 A, C Tubulin alpha chain 9940
127 5XI7 1 A, C Tubulin alpha chain 41807
128 4X20 1 A, C Tubulin alpha chain 9940
129 5MIO 1 A Tubulin alpha-1B chain 9913
130 4X1K 1 A, C Tubulin alpha chain 9940
131 6GWD 1 A, C, E ALPHA-TUBULIN 9940
132 4EB6 1 A, C Tubulin alpha chain 9940
133 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
134 5LP6 1 A, C Tubulin alpha-1B chain 9913
135 3HKE 1 A, C Tubulin alpha chain 9940
136 3HKB 1 A, C Tubulin alpha chain 9940
137 3HKD 1 A, C Tubulin alpha chain 9940
138 3HKC 1 A, C Tubulin alpha chain 9940
139 1SA0 1 A, C Tubulin alpha chain 9913
140 6BBN 1 A, C Tubulin alpha-1B chain 9913
141 3N2G 1 A, C Tubulin alpha chain 9940
142 6GVM 1 A Tubulin alpha chain 9940
143 3E22 1 A, C Tubulin alpha-1C chain 9913
144 1SA1 1 A, C Tubulin alpha chain 9913
145 1Z2B 1 A, C Tubulin alpha chain 9913
146 3DU7 1 A, C Tubulin alpha-1C chain 9913
147 3N2K 1 A, C Tubulin alpha chain 9940
148 4YJ3 1 A, C Tubulin alpha-1B chain 9913
149 4F61 1 A, C, E, G Tubulin alpha chain 9940
150 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
151 1FFX 1 A, C PROTEIN (TUBULIN) 9913
152 6U42 2 0B, 0F, 0H, 0J, 0L, 0N, 0P, 0R, 0V, 0X, 0Z, 1B, 1D, 1F, 1H, 1L, 1N, 1P, 1R, 1T, 1V, 1X, 1Z, 2, 2B, 2D, 2F, 2H, 2J, 2L, 2N, 2P, 2R, 2T, 2V, 2X, 2Z, 3B, 3D, 3F, 3H, 3J, 3L, 3N, 3P, 3R, 3T, 4, 6, 8, A0, A2, A4, A8, B0, B2, B4, B7, B9, C1, C5, C7, C9, D1, D3, D5, D7, E1, E3, E5, E7, E9, F1, F3, F5, F7, F9, G1, G3, G5, G7, G9, H1, H3, H5, H7, H9, I1, I3, I5, I7, I9, J1, J3, J5, J7, J9, K1, K3, K5, K7, K9, L1, L3, L5, L7, L9, M1, M3, M5, M7, M9, N1, N3, N5, N7, N9, O1, O3, O5, O7, O9, P3, P5, P7, P9, Q1, Q3, Q5, Q9, R1, R3, R5, R7, R9, S1, S5, S7, S9, T1, T3, T5, T7, U1, U3, U5, U7, U9, V1, V3, V7, V9, W1, W3, W5, W7, W9, X3, X5, X7, X9, Y1, Y3, Y5, Y9, Z1, Z3, Z5, Z7, Z9 Tubulin alpha 3055
153 6U0H 1 A Tubulin alpha chain 5911
154 6U0T 1 C, D, E, F, G, H Tubulin alpha chain 5911
155 6U0U 1 C, D, E, F, G, H Tubulin alpha chain 5911
156 6S8M 3 A Tubulin alpha-1 chain 4896
157 6RZA 2 A, C Tubulin alpha-1B chain 9823
158 6RZB 1 A Tubulin alpha-1B chain 9823
159 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
160 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
161 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
162 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
163 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
164 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
165 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
166 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
167 6I2I 1 A Tubulin alpha-1B chain 9606
168 6MLQ 1 A Tubulin alpha-1A chain 9823
169 6MLR 1 A Tubulin alpha-1A chain 9823
170 6E88 1 A, C, H, I, L, M Tubulin alpha-2 chain 6239
171 6E7B 2 A Tubulin alpha-1B chain 9606
172 6E7C 2 A Tubulin alpha-1B chain 9606
173 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
174 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
175 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
176 6CVJ 1 A Tubulin alpha-1B chain 9823
177 6CVN 2 B Tubulin alpha-1B chain 9823
178 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
179 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
180 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
181 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
182 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
183 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
184 6B0C 1 A, C Tubulin alpha-1B chain 9823
185 6B0I 1 A Tubulin alpha-1B chain 9823
186 6B0L 1 A Tubulin alpha-1B chain 9823
187 5OGC 2 A Tubulin alpha chain 9913
188 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
189 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
190 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
191 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
192 5OCU 2 A Tubulin alpha chain 9913
193 5OAM 2 A Tubulin alpha chain 9913
194 5W3F 1 A Tubulin alpha-1 chain 4932
195 5W3H 1 A Tubulin alpha-1 chain 4932
196 5W3J 1 A Tubulin alpha-1 chain 4932
197 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
198 5ND3 2 A Tubulin alpha chain 9913
199 5ND4 2 A Tubulin alpha chain 9913
200 5ND7 2 A Tubulin alpha chain 9913
201 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
202 5UCY 1 A Tubulin alpha chain 5911
203 5UBQ 1 A, C, E Tubulin alpha chain 5911
204 5MM4 2 A Tubulin alpha-1A chain 9823
205 5MM7 2 A Tubulin alpha-1A chain 9823
206 5MLV 1 B, E, H, K, M, Q Tubulin alpha-1 chain 4896
207 5MJS 3 E, F, G, H Tubulin alpha-1 chain 4896
208 5M5N 1 A Tubulin alpha-1D chain 9913
209 5M5O 1 A Tubulin alpha-1D chain 9913
210 5M5C 2 A, D Tubulin alpha chain 9913
211 5M5I 1 A Tubulin alpha-1D chain 9913
212 5M5L 1 A Tubulin alpha-1D chain 9913
213 5M5M 1 A Tubulin alpha-1D chain 9913
214 5M50 1 A, D Tubulin alpha chain 9913
215 5M54 2 A, D Tubulin alpha chain 9913
216 5SYF 1 A Tubulin alpha chain 9823
217 5SYG 1 A Tubulin alpha chain 9823
218 5SYC 1 A Tubulin alpha chain 9823
219 5SYE 1 A Tubulin alpha chain 9823
220 5KMG 1 A Tubulin alpha-1B chain 9823
221 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
222 5IJ0 1 A Tubulin alpha-1B chain 9606
223 5IJ9 1 A Tubulin alpha-1B chain 9606
224 5HNW 1 A Tubulin alpha-1B chain 9913
225 5HNX 1 A Tubulin alpha-1B chain 9913
226 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
227 5HNZ 1 A Tubulin alpha-1B chain 9913
228 3JAW 1 A, C Tubulin alpha-1B chain 9823
229 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
230 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
231 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
232 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
233 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
234 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
235 3J8X 2 A Tubulin alpha-1B chain 9823
236 3J8Y 2 A Tubulin alpha-1B chain 9823
237 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
238 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
239 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
240 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
241 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
242 4UXY 1 A ALPHA TUBULIN 9913
243 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
244 3J7I 1 A Tubulin alpha-1A chain 9823
245 3J6P 2 A Tubulin alpha-1A chain 9823
246 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
247 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
248 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
249 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
250 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
251 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
252 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
253 3J2U 2 A, C Tubulin alpha-1A chain 9913
254 3J1T 2 B Tubulin alpha-1B chain 9913
255 3J1U 2 B Tubulin alpha-1B chain 9913
256 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
257 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
258 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
259 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
260 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
261 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
262 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
263 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
264 3EDL 1 A Alpha-tubulin 9913
265 3EDL 4 F Alpha-tubulin 9913
266 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
267 2P4N 2 A Tubulin alpha chain 9823
268 2HXF 1 A Tubulin alpha chain 9823
269 2HXH 1 A Tubulin alpha chain 9823
270 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
271 1JFF 1 A tubulin alpha chain 9913
272 1IA0 1 A TUBULIN ALPHA CHAIN 9823
273 1TUB 1 A TUBULIN 9823