3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 174 176 41
95 % 235 274 12
90 % 238 277 13
70 % 254 293 14
50 % 254 293 18
40 % 508 586 3
30 % 519 597 7
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 56
95 % 234 272 14
90 % 247 285 7
70 % 255 293 13
50 % 255 293 17
40 % 509 586 3
30 % 520 597 7
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15679
95 % 3 3 16296
90 % 3 3 15994
70 % 3 3 14980
50 % 3 3 13556
40 % 3 3 12618
30 % 3 3 11574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 6Y6D 1 A, C Tubulin alpha-1B chain 9913
36 5YL2 1 A, C Tubulin alpha-1B chain 9823
37 4O4L 1 A, C Tubulin alpha-1B chain 9913
38 5LXS 1 A, C Tubulin alpha-1B chain 9913
39 5JQG 1 A, C Tubulin alpha-1B chain 9823
40 5JH7 1 A, C Tubulin alpha-1B chain 9913
41 5J2T 1 A, C Tubulin alpha-1B chain 9913
42 5XKG 1 A, C Tubulin alpha-1B chain 9823
43 5JCB 1 A, C Tubulin alpha-1B chain 9823
44 4O2B 1 A, C Tubulin alpha-1B chain 9913
45 4O4J 1 A, C Tubulin alpha-1B chain 9913
46 5MF4 1 A, C Tubulin alpha-1B chain 9913
47 3RYI 1 A, C Tubulin alpha chain 9940
48 5CB4 1 A, C Tubulin alpha 41807
49 5JVD 1 A, C Tubulin alpha-1B chain 9913
50 5XKH 1 A, C Tubulin alpha-1B chain 9823
51 6FII 1 A, C Tubulin alpha-1B chain 9913
52 6O5M 1 A, C Tubulin alpha-1B chain 9823
53 5XP3 1 A, C Tubulin alpha-1B chain 9823
54 4I50 1 A, C Tubulin alpha-1B chain 9913
55 6S9E 1 A, C Tubulin alpha-1B chain 9913
56 6BR1 1 A, C Tubulin alpha-1B chain 9823
57 6QQN 1 A, C Tubulin alpha-1B chain 9913
58 3RYF 1 A, C Tubulin alpha chain 9940
59 4O4I 1 A, C Tubulin alpha-1B chain 9913
60 5LOV 1 A, C Tubulin alpha-1B chain 9913
61 5LYJ 1 A, C Tubulin alpha-1B chain 9913
62 5OV7 1 A, C Tubulin alpha-1B chain 9913
63 6NNG 1 A, C Tubulin alpha-1B chain 9823
64 5CA1 1 A, C Tubulin alpha 41807
65 4ZOL 1 A, C Tubulin alpha-1B chain 9823
66 5XLZ 1 A, C Tubulin alpha-1B chain 9913
67 6HX8 1 A, C Tubulin alpha-1B chain 9913
68 6GJ4 1 A, C Tubulin alpha-1B chain 9913
69 6GF3 1 A, C Tubulin alpha-1B chain 9913
70 4ZI7 1 A, C Tubulin alpha-1B chain 9823
71 6FJF 1 A, C Tubulin alpha-1B chain 9913
72 5BMV 1 A, C Tubulin alpha-1B chain 9913
73 6BRF 1 A, C Tubulin alpha-1B chain 9823
74 6EG5 1 A, C Tubulin alpha-1B chain 9823
75 6GWC 1 A ALPHA-TUBULIN 9940
76 4O2A 1 A, C Tubulin alpha-1B chain 9913
77 4F6R 1 A Tubulin alpha chain 9940
78 5KX5 1 A, C Tubulin alpha chain 9940
79 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
80 5CA0 1 A, C Tubulin alpha-1B chain 9823
81 5NJH 1 A, C Tubulin alpha-1B chain 9913
82 5O7A 1 A, C Tubulin alpha-1B chain 9913
83 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
84 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
85 6BS2 1 A, C Tubulin alpha-1B chain 9823
86 6PC4 1 A, C Tubulin alpha-1B chain 9823
87 4YJ2 1 A, C Tubulin alpha-1B chain 9913
88 6H9B 1 A, C Tubulin alpha chain 9940
89 3RYH 1 A, C Tubulin alpha chain 9940
90 6GZE 1 A, C Tubulin alpha-1B chain 9913
91 4IIJ 1 A, C Tubulin alpha-1B chain 9913
92 5XAF 1 A, C Tubulin alpha-1B chain 9913
93 5J2U 1 A, C Tubulin alpha-1B chain 9913
94 6KNZ 1 A, C Tubulin alpha-1B chain 9913
95 5YZ3 1 A, C Tubulin alpha-1B chain 9913
96 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
97 6N47 1 A, C Tubulin alpha-1B chain 9823
98 3UT5 1 A, C Tubulin alpha chain 9940
99 6O61 1 A, C Tubulin alpha-1B chain 9823
100 5XAG 1 A, C Tubulin alpha-1B chain 9913
101 6GVN 1 A Tubulin alpha chain 9940
102 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
103 6BRY 1 A, C Tubulin alpha-1B chain 9823
104 6K9V 1 A, C Tubulin alpha-1B chain 9913
105 6I5C 1 A, C Tubulin alpha-1B chain 9913
106 5XKE 1 A, C Tubulin alpha-1B chain 9823
107 5C8Y 1 A, C Tubulin alpha 41807
108 5YL4 1 A, C Tubulin alpha chain 41807
109 6JCJ 1 A, C Tubulin alpha-1B chain 9823
110 6D88 1 A, C Tubulin alpha-1B chain 9823
111 5YLJ 1 A, C Tubulin alpha-1B chain 9823
112 5XLT 1 A, C Tubulin alpha-1B chain 9913
113 5ZXH 1 A, C Tubulin alpha-1B chain 9823
114 5XKF 1 A, C Tubulin alpha-1B chain 9823
115 6AGK 1 A, C Tubulin alpha-1B chain 9823
116 5H7O 1 A, C Tubulin alpha-1B chain 9823
117 5XIW 1 A, C Tubulin alpha-1B chain 9823
118 6GX7 1 A, C Tubulin alpha chain 9940
119 4HNA 1 A Tubulin alpha chain 9940
120 5XHC 1 A, C Tubulin alpha chain 41807
121 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
122 6O5N 1 A, C Tubulin alpha-1B chain 9823
123 4X1I 1 A, C Tubulin alpha chain 9940
124 5XI5 1 A, C Tubulin alpha chain 41807
125 5Z4U 1 A, C Tubulin alpha-1B chain 9823
126 5YLS 1 A, C Tubulin alpha-1B chain 9823
127 4X1Y 1 A, C Tubulin alpha chain 9940
128 5XI7 1 A, C Tubulin alpha chain 41807
129 4X20 1 A, C Tubulin alpha chain 9940
130 5MIO 1 A Tubulin alpha-1B chain 9913
131 4X1K 1 A, C Tubulin alpha chain 9940
132 6GWD 1 A, C, E ALPHA-TUBULIN 9940
133 4EB6 1 A, C Tubulin alpha chain 9940
134 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
135 5LP6 1 A, C Tubulin alpha-1B chain 9913
136 3HKE 1 A, C Tubulin alpha chain 9940
137 3HKB 1 A, C Tubulin alpha chain 9940
138 3HKD 1 A, C Tubulin alpha chain 9940
139 3HKC 1 A, C Tubulin alpha chain 9940
140 1SA0 1 A, C Tubulin alpha chain 9913
141 6BBN 1 A, C Tubulin alpha-1B chain 9913
142 3N2G 1 A, C Tubulin alpha chain 9940
143 6GVM 1 A Tubulin alpha chain 9940
144 3E22 1 A, C Tubulin alpha-1C chain 9913
145 1SA1 1 A, C Tubulin alpha chain 9913
146 1Z2B 1 A, C Tubulin alpha chain 9913
147 3DU7 1 A, C Tubulin alpha-1C chain 9913
148 3N2K 1 A, C Tubulin alpha chain 9940
149 4YJ3 1 A, C Tubulin alpha-1B chain 9913
150 4F61 1 A, C, E, G Tubulin alpha chain 9940
151 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
152 1FFX 1 A, C PROTEIN (TUBULIN) 9913
153 6WVL 1 A, C Tubulin alpha-1B chain 9913
154 6WVM 1 A, C Tubulin alpha-1B chain 9913
155 6WVR 1 A, C Tubulin alpha-1B chain 9913
156 6VPO 1 A Tubulin alpha-1A chain 9823
157 6VPP 1 A Tubulin alpha-1A chain 9823
158 6TIW 3 A Tubulin alpha-1B chain 9823
159 6TA3 2 A Tubulin alpha-1B chain 9823
160 6TA4 2 A Tubulin alpha-1B chain 9823
161 6SES 1 A, C Tubulin alpha-1B chain 9913
162 6KIO 3 a Tubulin alpha-1A chain 9823
163 6KIQ 1 a Alpha tubulin 9823
164 6RZA 2 A, C Tubulin alpha-1B chain 9823
165 6RZB 1 A Tubulin alpha-1B chain 9823
166 6OJQ 2 A Tubulin alpha-1B chain 9913
167 6REV 3 A, a Tubulin alpha-1B chain 9913
168 6RF2 1 A, a Tubulin alpha-1B chain 9913
169 6RF8 3 A, a Tubulin alpha-1B chain 9913
170 6RFD 1 A, a Tubulin alpha-1B chain 9913
171 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
172 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
173 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
174 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
175 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
176 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
177 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
178 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
179 6I2I 1 A Tubulin alpha-1B chain 9606
180 6MLQ 1 A Tubulin alpha-1A chain 9823
181 6MLR 1 A Tubulin alpha-1A chain 9823
182 6E7B 2 A Tubulin alpha-1B chain 9606
183 6E7C 2 A Tubulin alpha-1B chain 9606
184 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
185 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
186 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
187 6CVJ 1 A Tubulin alpha-1B chain 9823
188 6CVN 2 B Tubulin alpha-1B chain 9823
189 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
190 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
191 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
192 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
193 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
194 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
195 6B0C 1 A, C Tubulin alpha-1B chain 9823
196 6B0I 1 A Tubulin alpha-1B chain 9823
197 6B0L 1 A Tubulin alpha-1B chain 9823
198 5OGC 2 A Tubulin alpha chain 9913
199 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
200 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
201 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
202 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
203 5OCU 2 A Tubulin alpha chain 9913
204 5OAM 2 A Tubulin alpha chain 9913
205 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
206 5ND3 2 A Tubulin alpha chain 9913
207 5ND4 2 A Tubulin alpha chain 9913
208 5ND7 2 A Tubulin alpha chain 9913
209 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
210 5MM4 2 A Tubulin alpha-1A chain 9823
211 5MM7 2 A Tubulin alpha-1A chain 9823
212 5M5N 1 A Tubulin alpha-1D chain 9913
213 5M5O 1 A Tubulin alpha-1D chain 9913
214 5M5C 2 A, D Tubulin alpha chain 9913
215 5M5I 1 A Tubulin alpha-1D chain 9913
216 5M5L 1 A Tubulin alpha-1D chain 9913
217 5M5M 1 A Tubulin alpha-1D chain 9913
218 5M50 1 A, D Tubulin alpha chain 9913
219 5M54 2 A, D Tubulin alpha chain 9913
220 5SYF 1 A Tubulin alpha chain 9823
221 5SYG 1 A Tubulin alpha chain 9823
222 5SYC 1 A Tubulin alpha chain 9823
223 5SYE 1 A Tubulin alpha chain 9823
224 5KMG 1 A Tubulin alpha-1B chain 9823
225 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
226 5IJ0 1 A Tubulin alpha-1B chain 9606
227 5IJ9 1 A Tubulin alpha-1B chain 9606
228 5HNW 1 A Tubulin alpha-1B chain 9913
229 5HNX 1 A Tubulin alpha-1B chain 9913
230 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
231 5HNZ 1 A Tubulin alpha-1B chain 9913
232 3JAW 1 A, C Tubulin alpha-1B chain 9823
233 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
234 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
235 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
236 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
237 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
238 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
239 3J8X 2 A Tubulin alpha-1B chain 9823
240 3J8Y 2 A Tubulin alpha-1B chain 9823
241 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
242 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
243 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
244 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
245 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
246 4UXY 1 A ALPHA TUBULIN 9913
247 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
248 3J7I 1 A Tubulin alpha-1A chain 9823
249 3J6P 2 A Tubulin alpha-1A chain 9823
250 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
251 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
252 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
253 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
254 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
255 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
256 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
257 3J2U 2 A, C Tubulin alpha-1A chain 9913
258 3J1T 2 B Tubulin alpha-1B chain 9913
259 3J1U 2 B Tubulin alpha-1B chain 9913
260 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
261 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
262 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
263 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
264 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
265 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
266 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
267 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
268 3EDL 1 A Tubulin alpha-1A chain 9913
269 3EDL 4 F Tubulin alpha-1A chain 9913
270 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
271 2P4N 2 A Tubulin alpha chain 9823
272 2HXF 1 A Tubulin alpha chain 9823
273 2HXH 1 A Tubulin alpha chain 9823
274 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
275 1JFF 1 A tubulin alpha chain 9913
276 1IA0 1 A TUBULIN ALPHA CHAIN 9823
277 1TUB 1 A TUBULIN 9823