Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 156 43
95 % 209 248 12
90 % 210 249 15
70 % 224 263 21
50 % 224 263 41
40 % 448 526 8
30 % 456 534 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 76
95 % 207 245 13
90 % 217 255 13
70 % 225 263 20
50 % 225 263 39
40 % 449 526 8
30 % 457 534 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15752
95 % 3 3 13432
90 % 3 3 14622
70 % 3 3 12551
50 % 3 3 12674
40 % 3 3 11689
30 % 3 3 10725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5IYZ 1 A, C Tubulin alpha-1B chain 9913
2 4I4T 1 A, C Tubulin alpha-1B chain 9913
3 5NQU 1 A Tubulin alpha-1B chain 9913
4 5LXT 1 A, C Tubulin alpha-1B chain 9913
5 5EYP 1 A Tubulin alpha chain 9940
6 6QTN 1 A, C Tubulin alpha-1B chain 9913
7 4IHJ 1 A, C Tubulin alpha-1B chain 9913
8 4TV9 1 A, C Tubulin alpha-1B chain 9913
9 5M7E 1 A, C Tubulin alpha-1B chain 9913
10 3RYC 1 A, C Tubulin alpha chain 9940
11 5EZY 1 A, C Tubulin alpha-1B chain 9823
12 4LNU 1 A Tubulin alpha chain 9940
13 5EIB 1 C Tubulin alpha-1B chain 9913
14 6FKL 1 A, C Tubulin alpha-1B chain 9913
15 6FJM 1 A, C Tubulin alpha-1B chain 9913
16 5M8G 1 A, C Tubulin alpha-1B chain 9913
17 5NM5 1 A Tubulin alpha-1B chain 9913
18 5NFZ 1 A, C Tubulin alpha-1B chain 9913
19 4TUY 1 A, C Tubulin alpha-1B chain 9913
20 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
21 6FKJ 1 A, C Tubulin alpha-1B chain 9913
22 5LA6 1 A, C Tubulin alpha-1B chain 9913
23 6F7C 1 A, C Tubulin alpha-1B chain 9913
24 4I55 1 A, C Tubulin alpha-1B chain 9913
25 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
26 5NQT 1 A Tubulin alpha-1B chain 9913
27 4O4H 1 A, C Tubulin alpha-1B chain 9913
28 5NG1 1 A, C Tubulin alpha-1B chain 9913
29 5OSK 1 A, C Tubulin alpha-1B chain 9913
30 5ITZ 1 A Tubulin alpha-1B chain 9913
31 5M8D 1 A, C Tubulin alpha-1B chain 9913
32 5M7G 1 A, C Tubulin alpha-1B chain 9913
33 5YL2 1 A, C Tubulin alpha-1B chain 9823
34 4O4L 1 A, C Tubulin alpha-1B chain 9913
35 5LXS 1 A, C Tubulin alpha-1B chain 9913
36 5JQG 1 A, C Tubulin alpha-1B chain 9823
37 5JH7 1 A, C Tubulin alpha-1B chain 9913
38 5J2T 1 A, C Tubulin alpha-1B chain 9913
39 5XKG 1 A, C Tubulin alpha-1B chain 9823
40 5JCB 1 A, C Tubulin alpha-1B chain 9823
41 4O2B 1 A, C Tubulin alpha-1B chain 9913
42 4O4J 1 A, C Tubulin alpha-1B chain 9913
43 5MF4 1 A, C Tubulin alpha-1B chain 9913
44 3RYI 1 A, C Tubulin alpha chain 9940
45 5CB4 1 A, C Tubulin alpha 41807
46 5JVD 1 A, C Tubulin alpha-1B chain 9913
47 5XKH 1 A, C Tubulin alpha-1B chain 9823
48 6FII 1 A, C Tubulin alpha-1B chain 9913
49 6O5M 1 A, C Tubulin alpha-1B chain 9823
50 5XP3 1 A, C Tubulin alpha-1B chain 9823
51 4I50 1 A, C Tubulin alpha-1B chain 9913
52 6BR1 1 A, C Tubulin alpha-1B chain 9823
53 6QQN 1 A, C Tubulin alpha-1B chain 9913
54 3RYF 1 A, C Tubulin alpha chain 9940
55 4O4I 1 A, C Tubulin alpha-1B chain 9913
56 5LOV 1 A, C Tubulin alpha-1B chain 9913
57 5LYJ 1 A, C Tubulin alpha-1B chain 9913
58 5OV7 1 A, C Tubulin alpha-1B chain 9913
59 6NNG 1 A, C Tubulin alpha-1B chain 9823
60 5CA1 1 A, C Tubulin alpha 41807
61 4ZOL 1 A, C Tubulin alpha-1B chain 9823
62 5XLZ 1 A, C Tubulin alpha-1B chain 9913
63 6HX8 1 A, C Tubulin alpha-1B chain 9913
64 6GJ4 1 A, C Tubulin alpha-1B chain 9913
65 6GF3 1 A, C Tubulin alpha-1B chain 9913
66 4ZI7 1 A, C Tubulin alpha-1B chain 9823
67 6FJF 1 A, C Tubulin alpha-1B chain 9913
68 5BMV 1 A, C Tubulin alpha-1B chain 9913
69 6BRF 1 A, C Tubulin alpha-1B chain 9823
70 6EG5 1 A, C Tubulin alpha-1B chain 9823
71 6GWC 1 A ALPHA-TUBULIN 9940
72 4O2A 1 A, C Tubulin alpha-1B chain 9913
73 4F6R 1 A Tubulin alpha chain 9940
74 5KX5 1 A, C Tubulin alpha chain 9940
75 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
76 5CA0 1 A, C Tubulin alpha-1B chain 9823
77 5NJH 1 A, C Tubulin alpha-1B chain 9913
78 5O7A 1 A, C Tubulin alpha-1B chain 9913
79 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
80 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
81 6BS2 1 A, C Tubulin alpha-1B chain 9823
82 4YJ2 1 A, C Tubulin alpha-1B chain 9913
83 6H9B 1 A, C Tubulin alpha chain 9940
84 3RYH 1 A, C Tubulin alpha chain 9940
85 4IIJ 1 A, C Tubulin alpha-1B chain 9913
86 5XAF 1 A, C Tubulin alpha-1B chain 9913
87 5J2U 1 A, C Tubulin alpha-1B chain 9913
88 5YZ3 1 A, C Tubulin alpha-1B chain 9913
89 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
90 3UT5 1 A, C Tubulin alpha chain 9940
91 6O61 1 A, C Tubulin alpha-1B chain 9823
92 5XAG 1 A, C Tubulin alpha-1B chain 9913
93 6GVN 1 A Tubulin alpha chain 9940
94 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
95 6BRY 1 A, C Tubulin alpha-1B chain 9823
96 6K9V 1 A, C Tubulin alpha-1B chain 9913
97 6I5C 1 A, C Tubulin alpha-1B chain 9913
98 5XKE 1 A, C Tubulin alpha-1B chain 9823
99 5C8Y 1 A, C Tubulin alpha 41807
100 5YL4 1 A, C Tubulin alpha chain 41807
101 6JCJ 1 A, C Tubulin alpha-1B chain 9823
102 6D88 1 A, C Tubulin alpha-1B chain 9823
103 5YLJ 1 A, C Tubulin alpha-1B chain 9823
104 5XLT 1 A, C Tubulin alpha-1B chain 9913
105 5ZXH 1 A, C Tubulin alpha-1B chain 9823
106 5XKF 1 A, C Tubulin alpha-1B chain 9823
107 6AGK 1 A, C Tubulin alpha-1B chain 9823
108 5H7O 1 A, C Tubulin alpha-1B chain 9823
109 5XIW 1 A, C Tubulin alpha-1B chain 9823
110 6GX7 1 A, C Tubulin alpha chain 9940
111 4HNA 1 A Tubulin alpha chain 9940
112 5XHC 1 A, C Tubulin alpha chain 41807
113 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
114 6O5N 1 A, C Tubulin alpha-1B chain 9823
115 4X1I 1 A, C Tubulin alpha chain 9940
116 5XI5 1 A, C Tubulin alpha chain 41807
117 5Z4U 1 A, C Tubulin alpha-1B chain 9823
118 5YLS 1 A, C Tubulin alpha-1B chain 9823
119 4X1Y 1 A, C Tubulin alpha chain 9940
120 5XI7 1 A, C Tubulin alpha chain 41807
121 4X20 1 A, C Tubulin alpha chain 9940
122 5MIO 1 A Tubulin alpha-1B chain 9913
123 4X1K 1 A, C Tubulin alpha chain 9940
124 6GWD 1 A, C, E ALPHA-TUBULIN 9940
125 4EB6 1 A, C Tubulin alpha chain 9940
126 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
127 5LP6 1 A, C Tubulin alpha-1B chain 9913
128 3HKE 1 A, C Tubulin alpha chain 9940
129 3HKB 1 A, C Tubulin alpha chain 9940
130 3HKD 1 A, C Tubulin alpha chain 9940
131 3HKC 1 A, C Tubulin alpha chain 9940
132 1SA0 1 A, C Tubulin alpha chain 9913
133 6BBN 1 A, C Tubulin alpha-1B chain 9913
134 3N2G 1 A, C Tubulin alpha chain 9940
135 6GVM 1 A Tubulin alpha chain 9940
136 3E22 1 A, C Tubulin alpha-1C chain 9913
137 1SA1 1 A, C Tubulin alpha chain 9913
138 1Z2B 1 A, C Tubulin alpha chain 9913
139 3DU7 1 A, C Tubulin alpha-1C chain 9913
140 3N2K 1 A, C Tubulin alpha chain 9940
141 4YJ3 1 A, C Tubulin alpha-1B chain 9913
142 4F61 1 A, C, E, G Tubulin alpha chain 9940
143 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
144 1FFX 1 A, C PROTEIN (TUBULIN) 9913
145 6RZA 2 A, C Tubulin alpha-1B chain 9823
146 6RZB 1 A Tubulin alpha-1B chain 9823
147 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
148 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
149 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
150 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
151 6I2I 1 A Tubulin alpha-1B chain 9606
152 6MLQ 1 A Tubulin alpha-1A chain 9823
153 6MLR 1 A Tubulin alpha-1A chain 9823
154 6E7B 2 A Tubulin alpha-1B chain 9606
155 6E7C 2 A Tubulin alpha-1B chain 9606
156 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
157 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
158 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
159 6CVJ 1 A Tubulin alpha-1B chain 9823
160 6CVN 2 B Tubulin alpha-1B chain 9823
161 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
162 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
163 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
164 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
165 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
166 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
167 6B0C 1 A, C Tubulin alpha-1B chain 9823
168 6B0I 1 A Tubulin alpha-1B chain 9823
169 6B0L 1 A Tubulin alpha-1B chain 9823
170 5OGC 2 A Tubulin alpha chain 9913
171 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
172 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
173 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
174 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
175 5OCU 2 A Tubulin alpha chain 9913
176 5OAM 2 A Tubulin alpha chain 9913
177 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
178 5ND3 2 A Tubulin alpha chain 9913
179 5ND4 2 A Tubulin alpha chain 9913
180 5ND7 2 A Tubulin alpha chain 9913
181 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
182 5MM4 2 A Tubulin alpha-1A chain 9823
183 5MM7 2 A Tubulin alpha-1A chain 9823
184 5M5N 1 A Tubulin alpha-1D chain 9913
185 5M5O 1 A Tubulin alpha-1D chain 9913
186 5M5C 2 A, D Tubulin alpha chain 9913
187 5M5I 1 A Tubulin alpha-1D chain 9913
188 5M5L 1 A Tubulin alpha-1D chain 9913
189 5M5M 1 A Tubulin alpha-1D chain 9913
190 5M50 1 A, D Tubulin alpha chain 9913
191 5M54 2 A, D Tubulin alpha chain 9913
192 5SYF 1 A Tubulin alpha chain 9823
193 5SYG 1 A Tubulin alpha chain 9823
194 5SYC 1 A Tubulin alpha chain 9823
195 5SYE 1 A Tubulin alpha chain 9823
196 5KMG 1 A Tubulin alpha-1B chain 9823
197 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
198 5IJ0 1 A Tubulin alpha-1B chain 9606
199 5IJ9 1 A Tubulin alpha-1B chain 9606
200 5HNW 1 A Tubulin alpha-1B chain 9913
201 5HNX 1 A Tubulin alpha-1B chain 9913
202 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
203 5HNZ 1 A Tubulin alpha-1B chain 9913
204 3JAW 1 A, C Tubulin alpha-1B chain 9823
205 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
206 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
207 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
208 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
209 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
210 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
211 3J8X 2 A Tubulin alpha-1B chain 9823
212 3J8Y 2 A Tubulin alpha-1B chain 9823
213 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
214 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
215 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
216 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
217 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
218 4UXY 1 A ALPHA TUBULIN 9913
219 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
220 3J7I 1 A Tubulin alpha-1A chain 9823
221 3J6P 2 A Tubulin alpha-1A chain 9823
222 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
223 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
224 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
225 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
226 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
227 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
228 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
229 3J2U 2 A, C Tubulin alpha-1A chain 9913
230 3J1T 2 B Tubulin alpha-1B chain 9913
231 3J1U 2 B Tubulin alpha-1B chain 9913
232 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
233 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
234 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
235 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
236 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
237 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
238 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
239 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
240 3EDL 1 A Alpha-tubulin 9913
241 3EDL 4 F Alpha-tubulin 9913
242 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
243 2P4N 2 A Tubulin alpha chain 9823
244 2HXF 1 A Tubulin alpha chain 9823
245 2HXH 1 A Tubulin alpha chain 9823
246 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
247 1JFF 1 A tubulin alpha chain 9913
248 1IA0 1 A TUBULIN ALPHA CHAIN 9823
249 1TUB 1 A TUBULIN 9823