3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 179 40
95 % 239 278 11
90 % 242 281 14
70 % 258 297 15
50 % 258 297 18
40 % 516 594 4
30 % 527 605 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 58
95 % 237 275 13
90 % 250 288 9
70 % 259 297 14
50 % 259 297 17
40 % 517 594 4
30 % 528 605 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18199
95 % 3 3 16401
90 % 3 3 16079
70 % 3 3 13725
50 % 3 3 12527
40 % 3 3 11729
30 % 3 3 11765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 6Y6D 1 A, C Tubulin alpha-1B chain 9913
36 5YL2 1 A, C Tubulin alpha-1B chain 9823
37 4O4L 1 A, C Tubulin alpha-1B chain 9913
38 5LXS 1 A, C Tubulin alpha-1B chain 9913
39 5JQG 1 A, C Tubulin alpha-1B chain 9823
40 5JH7 1 A, C Tubulin alpha-1B chain 9913
41 5J2T 1 A, C Tubulin alpha-1B chain 9913
42 5XKG 1 A, C Tubulin alpha-1B chain 9823
43 5JCB 1 A, C Tubulin alpha-1B chain 9823
44 4O2B 1 A, C Tubulin alpha-1B chain 9913
45 4O4J 1 A, C Tubulin alpha-1B chain 9913
46 5MF4 1 A, C Tubulin alpha-1B chain 9913
47 3RYI 1 A, C Tubulin alpha chain 9940
48 5CB4 1 A, C Tubulin alpha 41807
49 5JVD 1 A, C Tubulin alpha-1B chain 9913
50 5XKH 1 A, C Tubulin alpha-1B chain 9823
51 6FII 1 A, C Tubulin alpha-1B chain 9913
52 6O5M 1 A, C Tubulin alpha-1B chain 9823
53 5XP3 1 A, C Tubulin alpha-1B chain 9823
54 4I50 1 A, C Tubulin alpha-1B chain 9913
55 6S9E 1 A, C Tubulin alpha-1B chain 9913
56 6TDE 1 A, C Tubulin alpha chain 9940
57 6BR1 1 A, C Tubulin alpha-1B chain 9823
58 6QQN 1 A, C Tubulin alpha-1B chain 9913
59 3RYF 1 A, C Tubulin alpha chain 9940
60 4O4I 1 A, C Tubulin alpha-1B chain 9913
61 5LOV 1 A, C Tubulin alpha-1B chain 9913
62 5LYJ 1 A, C Tubulin alpha-1B chain 9913
63 5OV7 1 A, C Tubulin alpha-1B chain 9913
64 6NNG 1 A, C Tubulin alpha-1B chain 9823
65 5CA1 1 A, C Tubulin alpha 41807
66 4ZOL 1 A, C Tubulin alpha-1B chain 9823
67 5XLZ 1 A, C Tubulin alpha-1B chain 9913
68 6HX8 1 A, C Tubulin alpha-1B chain 9913
69 6GJ4 1 A, C Tubulin alpha-1B chain 9913
70 6GF3 1 A, C Tubulin alpha-1B chain 9913
71 4ZI7 1 A, C Tubulin alpha-1B chain 9823
72 6FJF 1 A, C Tubulin alpha-1B chain 9913
73 5BMV 1 A, C Tubulin alpha-1B chain 9913
74 6BRF 1 A, C Tubulin alpha-1B chain 9823
75 6EG5 1 A, C Tubulin alpha-1B chain 9823
76 6GWC 1 A ALPHA-TUBULIN 9940
77 4O2A 1 A, C Tubulin alpha-1B chain 9913
78 4F6R 1 A Tubulin alpha chain 9940
79 5KX5 1 A, C Tubulin alpha chain 9940
80 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
81 5CA0 1 A, C Tubulin alpha-1B chain 9823
82 5NJH 1 A, C Tubulin alpha-1B chain 9913
83 7JFR 1 A, C Tubulin alpha-1B chain 9913
84 5O7A 1 A, C Tubulin alpha-1B chain 9913
85 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
86 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
87 6BS2 1 A, C Tubulin alpha-1B chain 9823
88 6PC4 1 A, C Tubulin alpha-1B chain 9823
89 4YJ2 1 A, C Tubulin alpha-1B chain 9913
90 6H9B 1 A, C Tubulin alpha chain 9940
91 3RYH 1 A, C Tubulin alpha chain 9940
92 6GZE 1 A, C Tubulin alpha-1B chain 9913
93 4IIJ 1 A, C Tubulin alpha-1B chain 9913
94 5XAF 1 A, C Tubulin alpha-1B chain 9913
95 5J2U 1 A, C Tubulin alpha-1B chain 9913
96 6KNZ 1 A, C Tubulin alpha-1B chain 9913
97 5YZ3 1 A, C Tubulin alpha-1B chain 9913
98 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
99 6N47 1 A, C Tubulin alpha-1B chain 9823
100 3UT5 1 A, C Tubulin alpha chain 9940
101 6O61 1 A, C Tubulin alpha-1B chain 9823
102 5XAG 1 A, C Tubulin alpha-1B chain 9913
103 6GVN 1 A Tubulin alpha chain 9940
104 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
105 6BRY 1 A, C Tubulin alpha-1B chain 9823
106 6K9V 1 A, C Tubulin alpha-1B chain 9913
107 6KPP 1 A, C Tubulin alpha-1B chain 9823
108 6I5C 1 A, C Tubulin alpha-1B chain 9913
109 5XKE 1 A, C Tubulin alpha-1B chain 9823
110 5C8Y 1 A, C Tubulin alpha 41807
111 5YL4 1 A, C Tubulin alpha chain 41807
112 6JCJ 1 A, C Tubulin alpha-1B chain 9823
113 6D88 1 A, C Tubulin alpha-1B chain 9823
114 5YLJ 1 A, C Tubulin alpha-1B chain 9823
115 5XLT 1 A, C Tubulin alpha-1B chain 9913
116 5ZXH 1 A, C Tubulin alpha-1B chain 9823
117 5XKF 1 A, C Tubulin alpha-1B chain 9823
118 6AGK 1 A, C Tubulin alpha-1B chain 9823
119 5H7O 1 A, C Tubulin alpha-1B chain 9823
120 5XIW 1 A, C Tubulin alpha-1B chain 9823
121 6GX7 1 A, C Tubulin alpha chain 9940
122 4HNA 1 A Tubulin alpha chain 9940
123 5XHC 1 A, C Tubulin alpha chain 41807
124 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
125 6O5N 1 A, C Tubulin alpha-1B chain 9823
126 4X1I 1 A, C Tubulin alpha chain 9940
127 5XI5 1 A, C Tubulin alpha chain 41807
128 5Z4U 1 A, C Tubulin alpha-1B chain 9823
129 5YLS 1 A, C Tubulin alpha-1B chain 9823
130 4X1Y 1 A, C Tubulin alpha chain 9940
131 5XI7 1 A, C Tubulin alpha chain 41807
132 4X20 1 A, C Tubulin alpha chain 9940
133 5MIO 1 A Tubulin alpha-1B chain 9913
134 4X1K 1 A, C Tubulin alpha chain 9940
135 6GWD 1 A, C, E ALPHA-TUBULIN 9940
136 4EB6 1 A, C Tubulin alpha chain 9940
137 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
138 5LP6 1 A, C Tubulin alpha-1B chain 9913
139 3HKE 1 A, C Tubulin alpha chain 9940
140 3HKB 1 A, C Tubulin alpha chain 9940
141 3HKD 1 A, C Tubulin alpha chain 9940
142 3HKC 1 A, C Tubulin alpha chain 9940
143 1SA0 1 A, C Tubulin alpha chain 9913
144 6BBN 1 A, C Tubulin alpha-1B chain 9913
145 3N2G 1 A, C Tubulin alpha chain 9940
146 6GVM 1 A Tubulin alpha chain 9940
147 3E22 1 A, C Tubulin alpha-1C chain 9913
148 1SA1 1 A, C Tubulin alpha chain 9913
149 1Z2B 1 A, C Tubulin alpha chain 9913
150 3DU7 1 A, C Tubulin alpha-1C chain 9913
151 3N2K 1 A, C Tubulin alpha chain 9940
152 4YJ3 1 A, C Tubulin alpha-1B chain 9913
153 4F61 1 A, C, E, G Tubulin alpha chain 9940
154 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
155 1FFX 1 A, C PROTEIN (TUBULIN) 9913
156 6WVL 1 A, C Tubulin alpha-1B chain 9913
157 6WVM 1 A, C Tubulin alpha-1B chain 9913
158 6WVR 1 A, C Tubulin alpha-1B chain 9913
159 6WSL 1 A, E Tubulin alpha-1A chain 9606
160 6VPO 1 A Tubulin alpha-1A chain 9823
161 6VPP 1 A Tubulin alpha-1A chain 9823
162 6TIW 3 A Tubulin alpha-1B chain 9823
163 6TA3 2 A Tubulin alpha-1B chain 9823
164 6TA4 2 A Tubulin alpha-1B chain 9823
165 6SES 1 A, C Tubulin alpha-1B chain 9913
166 6RZA 2 A, C Tubulin alpha-1B chain 9823
167 6RZB 1 A Tubulin alpha-1B chain 9823
168 6OJQ 2 A Tubulin alpha-1B chain 9913
169 6REV 3 A, a Tubulin alpha-1B chain 9913
170 6RF2 1 A, a Tubulin alpha-1B chain 9913
171 6RF8 3 A, a Tubulin alpha-1B chain 9913
172 6RFD 1 A, a Tubulin alpha-1B chain 9913
173 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
174 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
175 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
176 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
177 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
178 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
179 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
180 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
181 6I2I 1 A Tubulin alpha-1B chain 9606
182 6MLQ 1 A Tubulin alpha-1A chain 9823
183 6MLR 1 A Tubulin alpha-1A chain 9823
184 6E7B 2 A Tubulin alpha-1B chain 9606
185 6E7C 2 A Tubulin alpha-1B chain 9606
186 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
187 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
188 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
189 6CVJ 1 A Tubulin alpha-1B chain 9823
190 6CVN 2 B Tubulin alpha-1B chain 9823
191 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
192 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
193 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
194 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
195 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
196 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
197 6B0C 1 A, C Tubulin alpha-1B chain 9823
198 6B0I 1 A Tubulin alpha-1B chain 9823
199 6B0L 1 A Tubulin alpha-1B chain 9823
200 5OGC 2 A Tubulin alpha chain 9913
201 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
202 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
203 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
204 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
205 5OCU 2 A Tubulin alpha chain 9913
206 5OAM 2 A Tubulin alpha chain 9913
207 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
208 5ND3 2 A Tubulin alpha chain 9913
209 5ND7 2 A Tubulin alpha chain 9913
210 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
211 5MM4 2 A Tubulin alpha-1A chain 9823
212 5MM7 2 A Tubulin alpha-1A chain 9823
213 5M5N 1 A Tubulin alpha-1D chain 9913
214 5M5O 1 A Tubulin alpha-1D chain 9913
215 5M5C 2 A, D Tubulin alpha chain 9913
216 5M5I 1 A Tubulin alpha-1D chain 9913
217 5M5L 1 A Tubulin alpha-1D chain 9913
218 5M5M 1 A Tubulin alpha-1D chain 9913
219 5M50 1 A, D Tubulin alpha chain 9913
220 5M54 2 A, D Tubulin alpha chain 9913
221 5SYF 1 A Tubulin alpha chain 9823
222 5SYG 1 A Tubulin alpha chain 9823
223 5SYC 1 A Tubulin alpha chain 9823
224 5SYE 1 A Tubulin alpha chain 9823
225 5KMG 1 A Tubulin alpha-1B chain 9823
226 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
227 5IJ0 1 A Tubulin alpha-1B chain 9606
228 5IJ9 1 A Tubulin alpha-1B chain 9606
229 5HNW 1 A Tubulin alpha-1B chain 9913
230 5HNX 1 A Tubulin alpha-1B chain 9913
231 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
232 5HNZ 1 A Tubulin alpha-1B chain 9913
233 3JAW 1 A, C Tubulin alpha-1B chain 9823
234 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
235 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
236 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
237 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
238 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
239 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
240 3J8X 2 A Tubulin alpha-1B chain 9823
241 3J8Y 2 A Tubulin alpha-1B chain 9823
242 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
243 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
244 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
245 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
246 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
247 4UXY 1 A ALPHA TUBULIN 9913
248 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
249 3J7I 1 A Tubulin alpha-1A chain 9823
250 3J6P 2 A Tubulin alpha-1A chain 9823
251 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
252 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
253 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
254 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
255 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
256 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
257 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
258 3J2U 2 A, C Tubulin alpha-1A chain 9913
259 3J1T 2 B Tubulin alpha-1B chain 9913
260 3J1U 2 B Tubulin alpha-1B chain 9913
261 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
262 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
263 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
264 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
265 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
266 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
267 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
268 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
269 3EDL 1 A Tubulin alpha-1A chain 9913
270 3EDL 4 F Tubulin alpha-1A chain 9913
271 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
272 2P4N 2 A Tubulin alpha chain 9823
273 2HXF 1 A Tubulin alpha chain 9823
274 2HXH 1 A Tubulin alpha chain 9823
275 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
276 1JFF 1 A tubulin alpha chain 9913
277 1IA0 1 A TUBULIN ALPHA CHAIN 9823
278 1TUB 1 A TUBULIN 9823