Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 156 43
95 % 209 248 12
90 % 210 249 15
70 % 224 263 21
50 % 224 263 41
40 % 448 526 8
30 % 456 534 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 76
95 % 207 245 13
90 % 217 255 13
70 % 225 263 20
50 % 225 263 39
40 % 449 526 8
30 % 457 534 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15752
95 % 3 3 13432
90 % 3 3 14622
70 % 3 3 12551
50 % 3 3 12674
40 % 3 3 11689
30 % 3 3 10725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5JQG 2 B, D Tubulin beta chain 9823
2 4ZOL 2 B, D Tubulin beta chain 9823
3 4ZI7 2 B, D Tubulin beta chain 9823
4 5BMV 2 B, D Tubulin beta chain 9823
5 4ZHQ 2 B, D Tubulin beta chain 9823
6 5FNV 2 B, D TUBULIN BETA CHAIN 10116
7 6MZG 2 B, D, H, J Tubulin beta chain 9823
8 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
9 1SA0 2 B, D Tubulin beta chain 9913
10 1SA1 2 B, D Tubulin beta chain 9913
11 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
12 1FFX 2 B, D PROTEIN (TUBULIN) 9913
13 6RZA 3 B, D Tubulin beta chain 9823
14 6RZB 2 B Tubulin beta chain 9823
15 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
16 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
17 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
18 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
19 6MLQ 2 B Tubulin beta chain 9823
20 6MLR 2 B Tubulin beta chain 9823
21 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
22 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
23 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
24 6CVJ 2 B, C Tubulin beta chain 9823
25 6CVN 1 A, C Tubulin beta chain 9823
26 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
27 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
28 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
29 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
30 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
31 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
32 5OGC 3 B Tubulin beta chain 9823
33 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
34 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
35 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
36 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
37 5OCU 3 B Tubulin beta chain 9823
38 5OAM 3 B Tubulin beta chain 9823
39 5ND4 3 B Tubulin beta-2B chain 9913
40 5MM4 3 B Tubulin beta chain 9823
41 5MM7 3 B Tubulin beta chain 9823
42 5M5C 3 B, E Tubulin beta-2B chain 9913
43 5M50 2 B, E Tubulin beta-2B chain 9913
44 5M54 3 B, E Tubulin beta-2B chain 9913
45 5SYF 2 B Tubulin beta chain 9823
46 5SYG 2 B Tubulin beta chain 9823
47 5SYC 2 B Tubulin beta chain 9823
48 5SYE 2 B Tubulin beta chain 9823
49 5KMG 2 B Tubulin beta chain 9823
50 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
51 3JAW 2 B, D Tubulin beta chain 9823
52 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
53 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
54 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
55 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
56 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
57 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
58 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
59 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
60 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
61 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
62 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
63 4UXY 2 B BETA TUBULIN 9913
64 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
65 3J7I 2 B Tubulin beta chain 9823
66 3J6P 3 B Tubulin beta chain 9823
67 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
68 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
69 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
70 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
71 3J2U 3 B, D Tubulin beta-2B chain 9913
72 3J1T 3 C Tubulin beta-2B chain 9913
73 3J1U 3 C Tubulin beta-2B chain 9913
74 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
75 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
76 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
77 3EDL 2 B, G Beta tubulin 9913
78 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
79 2P4N 3 B Tubulin beta chain 9913
80 2HXF 2 B Tubulin beta chain 9823
81 2HXH 2 B Tubulin beta chain 9823
82 1TVK 2 B Tubulin beta chain see REMARK 400 9913
83 1JFF 2 B tubulin beta chain 9913
84 1IA0 2 B TUBULIN BETA CHAIN 9823
85 1TUB 2 B TUBULIN 9823