3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 174 176 41
95 % 235 274 12
90 % 238 277 13
70 % 254 293 14
50 % 254 293 18
40 % 508 586 3
30 % 519 597 7
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 56
95 % 234 272 14
90 % 247 285 7
70 % 255 293 13
50 % 255 293 17
40 % 509 586 3
30 % 520 597 7
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15679
95 % 3 3 16296
90 % 3 3 15994
70 % 3 3 14980
50 % 3 3 13556
40 % 3 3 12618
30 % 3 3 11574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5JQG 2 B, D Tubulin beta chain 9823
2 4ZOL 2 B, D Tubulin beta chain 9823
3 4ZI7 2 B, D Tubulin beta chain 9823
4 5BMV 2 B, D Tubulin beta chain 9823
5 4ZHQ 2 B, D Tubulin beta chain 9823
6 5FNV 2 B, D TUBULIN BETA CHAIN 10116
7 6MZG 2 B, D, H, J Tubulin beta chain 9823
8 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
9 1SA0 2 B, D Tubulin beta chain 9913
10 1SA1 2 B, D Tubulin beta chain 9913
11 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
12 1FFX 2 B, D PROTEIN (TUBULIN) 9913
13 6VPO 2 B Tubulin beta chain 9823
14 6VPP 2 B Tubulin beta chain 9823
15 6TIW 2 B Tubulin beta chain 9823
16 6TA3 1 B Tubulin beta chain 9823
17 6TA4 1 B Tubulin beta chain 9823
18 6KIO 1 b Tubulin beta chain 9823
19 6KIQ 2 b Tubulin beta chain 9823
20 6RZA 3 B, D Tubulin beta chain 9823
21 6RZB 2 B Tubulin beta chain 9823
22 6OJQ 1 B Tubulin beta-2B chain 9913
23 6REV 2 B, b Tubulin beta-2B chain 9913
24 6RF2 2 B, b Tubulin beta-2B chain 9913
25 6RF8 2 B, b Tubulin beta-2B chain 9913
26 6RFD 2 B, b Tubulin beta-2B chain 9913
27 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
28 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
29 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
30 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
31 6MLQ 2 B Tubulin beta chain 9823
32 6MLR 2 B Tubulin beta chain 9823
33 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
34 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
35 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
36 6CVJ 2 B, C Tubulin beta chain 9823
37 6CVN 1 A, C Tubulin beta chain 9823
38 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
39 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
40 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
41 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
42 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
43 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
44 5OGC 3 B Tubulin beta chain 9823
45 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
46 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
47 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
48 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
49 5OCU 3 B Tubulin beta chain 9823
50 5OAM 3 B Tubulin beta chain 9823
51 5ND2 3 B Tubulin beta-2B chain 9913
52 5ND3 3 B Tubulin beta-2B chain 9913
53 5ND4 3 B Tubulin beta-2B chain 9913
54 5ND7 3 B Tubulin beta-2B chain 9913
55 5MM4 3 B Tubulin beta chain 9823
56 5MM7 3 B Tubulin beta chain 9823
57 5M5N 2 B Tubulin beta-2B chain 9913
58 5M5O 2 B Tubulin beta-2B chain 9913
59 5M5C 3 B, E Tubulin beta-2B chain 9913
60 5M5I 2 B Tubulin beta-2B chain 9913
61 5M5L 2 B Tubulin beta-2B chain 9913
62 5M5M 2 B Tubulin beta-2B chain 9913
63 5M50 2 B, E Tubulin beta-2B chain 9913
64 5M54 3 B, E Tubulin beta-2B chain 9913
65 5SYF 2 B Tubulin beta chain 9823
66 5SYG 2 B Tubulin beta chain 9823
67 5SYC 2 B Tubulin beta chain 9823
68 5SYE 2 B Tubulin beta chain 9823
69 5KMG 2 B Tubulin beta chain 9823
70 5HNW 2 B Tubulin beta-2B chain 9913
71 5HNX 2 B Tubulin beta-2B chain 9913
72 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
73 5HNZ 2 B Tubulin beta-2B chain 9913
74 3JAW 2 B, D Tubulin beta chain 9823
75 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
76 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
77 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
78 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
79 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
80 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
81 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
82 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
83 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
84 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
85 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
86 4UXY 2 B BETA TUBULIN 9913
87 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
88 3J7I 2 B Tubulin beta chain 9823
89 3J6P 3 B Tubulin beta chain 9823
90 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
91 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
92 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
93 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
94 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
95 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
96 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
97 3J2U 3 B, D Tubulin beta-2B chain 9913
98 3J1T 3 C Tubulin beta-2B chain 9913
99 3J1U 3 C Tubulin beta-2B chain 9913
100 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
101 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
102 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
103 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
104 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
105 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
106 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
107 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
108 3EDL 2 B, G Beta tubulin 9913
109 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
110 2P4N 3 B Tubulin beta chain 9913
111 2HXF 2 B Tubulin beta chain 9823
112 2HXH 2 B Tubulin beta chain 9823
113 1TVK 2 B Tubulin beta chain see REMARK 400 9913
114 1JFF 2 B tubulin beta chain 9913
115 1IA0 2 B TUBULIN BETA CHAIN 9823
116 1TUB 2 B TUBULIN 9823