3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 173 175 42
95 % 234 273 13
90 % 237 276 13
70 % 253 292 14
50 % 253 292 19
40 % 506 584 4
30 % 517 595 7
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 56
95 % 233 271 14
90 % 246 284 7
70 % 254 292 13
50 % 254 292 18
40 % 507 584 4
30 % 518 595 7
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 14854
95 % 3 3 15101
90 % 3 3 14856
70 % 3 3 14032
50 % 3 3 12768
40 % 3 3 11923
30 % 3 3 10951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 2 B Tubulin beta-2B chain 9913
2 5IYZ 2 B, D Tubulin beta-2B chain 9913
3 4I4T 2 B, D Tubulin beta-2B chain 9913
4 5NQU 2 B Tubulin beta-2B chain 9913
5 5LXT 2 B, D Tubulin beta-2B chain 9913
6 5EYP 2 B Tubulin beta chain 9940
7 6QTN 2 B, D Tubulin beta-2B chain 9913
8 6S8L 2 B Tubulin beta-3 chain 9606
9 4IHJ 2 B, D Tubulin beta-2B chain 9913
10 4TV9 2 B, D Tubulin beta-2B chain 9913
11 5M7E 2 B, D Tubulin beta-2B chain 9913
12 3RYC 2 B, D Tubulin beta chain 9940
13 5EZY 2 B, D Tubulin beta-2B chain 9913
14 4LNU 2 B Tubulin beta chain 9940
15 5EIB 2 D Tubulin beta-2B chain 9913
16 6FKL 2 B, D Tubulin beta-2B chain 9913
17 6FJM 2 B, D Tubulin beta-2B chain 9913
18 5M8G 2 B, D Tubulin beta-2B chain 9913
19 5NM5 2 B Tubulin beta-2B chain 9913
20 5NFZ 2 B, D Tubulin beta-2B chain 9913
21 4TUY 2 B, D Tubulin beta-2B chain 9913
22 4DRX 2 B, D Tubulin beta chain UNP residues 1-431 9940
23 6FKJ 2 B, D Tubulin beta-2B chain 9913
24 5LA6 2 B, D Tubulin beta-2B chain 9913
25 6F7C 2 B, D Tubulin beta-2B chain 9913
26 4I55 2 B, D Tubulin beta-2B chain 9913
27 4TV8 2 B, D Tubulin beta-2B chain 9913
28 5NQT 2 B Tubulin beta-2B chain 9913
29 4O4H 2 B, D Tubulin beta-2B chain 9913
30 5NG1 2 B, D Tubulin beta-2B chain 9913
31 5OSK 2 B, D Tubulin beta-2B chain 9913
32 5ITZ 2 B Tubulin beta-2B chain 9913
33 5M8D 2 B, D Tubulin beta-2B chain 9913
34 5M7G 2 B, D Tubulin beta-2B chain 9913
35 5YL2 2 B, D Tubulin beta chain 9823
36 4O4L 2 B, D Tubulin beta-2B chain 9913
37 5LXS 2 B, D Tubulin beta-2B chain 9913
38 5JQG 2 B, D Tubulin beta chain 9823
39 5JH7 2 B, D Tubulin beta-2B chain 9913
40 5J2T 2 B, D Tubulin beta-2B chain 9913
41 5XKG 2 B, D Tubulin beta chain 9823
42 5JCB 2 B, D Tubulin beta chain 9823
43 4O2B 2 B, D Tubulin beta-2B chain 9913
44 4O4J 2 B, D Tubulin beta-2B chain 9913
45 5MF4 2 B, D Tubulin beta-2B chain 9913
46 3RYI 2 B, D Tubulin beta chain 9940
47 5CB4 2 B, D Tubulin beta 41807
48 5JVD 2 B, D Tubulin beta-2B chain 9913
49 5XKH 2 B, D Tubulin beta chain 9823
50 6FII 2 B, D Tubulin beta-2B chain 9913
51 6O5M 2 B, D Tubulin beta-2B chain 9823
52 5XP3 2 B, D Tubulin beta chain 9823
53 4I50 2 B, D Tubulin beta-2B chain 9913
54 6S9E 2 B, D Tubulin beta-2B chain 9913
55 6BR1 2 B, D Tubulin beta-2B chain 9823
56 6QQN 2 B, D Tubulin beta-2B chain 9913
57 3RYF 2 B, D Tubulin beta chain 9940
58 4O4I 2 B, D Tubulin beta-2B chain 9913
59 5LOV 2 B, D Tubulin beta-2B chain 9913
60 5LYJ 2 B, D Tubulin beta-2B chain 9913
61 5OV7 2 B, D Tubulin beta-2B chain 9913
62 6NNG 2 B, D Tubulin beta-2B chain 9823
63 5CA1 2 B, D Tubulin beta-2 chain 9031
64 4ZOL 2 B, D Tubulin beta chain 9823
65 5XLZ 2 B, D Tubulin beta-2B chain 9913
66 6HX8 2 B, D Tubulin beta-2B chain 9913
67 6GJ4 2 B, D Tubulin beta-2B chain 9913
68 6GF3 2 B Tubulin beta-2B chain 9913
69 6GF3 3 D Tubulin beta-2B chain 9913
70 4ZI7 2 B, D Tubulin beta chain 9823
71 6FJF 2 B, D Tubulin beta-2B chain 9913
72 5BMV 2 B, D Tubulin beta chain 9823
73 6BRF 2 B, D Tubulin beta-2B chain 9823
74 6EG5 2 B, D Tubulin beta-2B chain 9913
75 6GWC 2 B Tubulin beta chain 9940
76 4O2A 2 B, D Tubulin beta-2B chain 9913
77 4F6R 2 B Tubulin beta chain 9940
78 5KX5 2 B, D Tubulin beta chain 9940
79 4ZHQ 2 B, D Tubulin beta chain 9823
80 5CA0 2 B, D Uncharacterized protein 9823
81 5NJH 2 B, D Tubulin beta-2B chain 9913
82 5O7A 2 B, D Tubulin beta-2B chain 9913
83 5FNV 2 B, D TUBULIN BETA CHAIN 10116
84 5GON 2 B, D Tubulin beta-2B chain UNP RESIDUES 1-431 9913
85 6BS2 2 B, D Tubulin beta-2B chain 9823
86 6PC4 2 B, D Tubulin beta-2B chain 9823
87 4YJ2 2 B, D Tubulin beta-2B chain 9913
88 6H9B 2 B, D Tubulin beta chain 9940
89 3RYH 2 B, D Tubulin beta chain 9940
90 6GZE 2 B, D Tubulin beta-2B chain 9913
91 4IIJ 2 B, D Tubulin beta-2B chain 9913
92 5XAF 2 B, D Tubulin beta-2B chain 9913
93 5J2U 2 B, D Tubulin beta-2B chain 9913
94 6KNZ 2 B, D Tubulin beta-2B chain 9913
95 5YZ3 2 B, D Tubulin beta-2B chain 9913
96 5H74 2 B, D Tubulin beta-2B chain 9913
97 6N47 2 B, D Tubulin beta-2B chain 9913
98 3UT5 2 B, D Tubulin beta chain 9940
99 6O61 2 B, D Tubulin beta-2B chain 9823
100 5XAG 2 B, D Tubulin beta-2B chain 9913
101 6GVN 2 B Tubulin beta chain 9940
102 5Z4P 2 B, D Tubulin beta-2B chain UNP residues 1-425 9913
103 6BRY 2 B, D Tubulin beta-2B chain 9823
104 6K9V 2 B, D Tubulin beta-2B chain 9913
105 6I5C 2 B, D Tubulin beta-2B chain 9913
106 5XKE 2 B, D Tubulin beta chain 9823
107 5C8Y 2 B, D Tubulin beta 41807
108 5YL4 2 B, D Tubulin beta chain 41807
109 6JCJ 2 B, D Tubulin beta-2B chain 9913
110 6D88 2 B, D Tubulin beta chain 9823
111 5YLJ 2 B, D Tubulin beta chain 9823
112 5XLT 2 B, D Tubulin beta-2B chain 9913
113 5ZXH 2 B, D Tubulin beta-2B chain 9913
114 5XKF 2 B, D Tubulin beta chain 9823
115 6AGK 2 B, D Tubulin beta-2B chain 9913
116 5H7O 2 B, D Tubulin beta-2B chain 9913
117 5XIW 2 B, D Tubulin beta chain 9823
118 6GX7 2 B, D Tubulin beta chain 9940
119 4FFB 2 B Tubulin beta chain 4932 3.6.5.6 | Details
120 4U3J 2 B Tubulin beta chain 4932
121 4HNA 2 B Tubulin beta chain 9940
122 5XHC 2 B, D Tubulin beta chain 41807
123 6MZG 2 B, D, H, J Tubulin beta chain 9823
124 6O5N 2 B, D Tubulin beta-2B chain 9823
125 4X1I 2 B, D Tubulin beta chain 9940
126 5XI5 2 B, D Tubulin beta chain 41807
127 5Z4U 2 B, D Tubulin beta-2B chain 9913
128 5YLS 2 B, D Tubulin beta chain 9823
129 4X1Y 2 B, D Tubulin beta chain 9940
130 5XI7 2 B, D Tubulin beta chain 41807
131 4X20 2 B, D Tubulin beta chain 9940
132 5MIO 2 B Tubulin beta chain 9940
133 4X1K 2 B, D Tubulin beta chain 9940
134 6GWD 2 B, D, F Tubulin beta chain 9940
135 4EB6 2 B, D Tubulin beta chain 9940
136 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
137 5LP6 2 B, D Tubulin beta-2B chain 9913
138 3HKE 2 B, D Tubulin beta chain 9940
139 3HKB 2 B, D Tubulin beta chain 9940
140 3HKD 2 B, D Tubulin beta chain 9940
141 3HKC 2 B, D Tubulin beta chain 9940
142 1SA0 2 B, D Tubulin beta chain 9913
143 6BBN 2 B, D Tubulin beta-2B chain 9913
144 3N2G 2 B, D Tubulin beta chain 9940
145 6GVM 2 B Tubulin beta chain 9940
146 3E22 2 B, D Tubulin beta-2B chain 9913
147 1SA1 2 B, D Tubulin beta chain 9913
148 1Z2B 2 B, D Tubulin beta chain 9913
149 3DU7 2 B, D Tubulin beta-2B chain 9913
150 3N2K 2 B, D Tubulin beta chain 9940
151 4YJ3 2 B, D Tubulin beta-2B chain 9913
152 4F61 2 B, D, F, H Tubulin beta chain 9940
153 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
154 1FFX 2 B, D PROTEIN (TUBULIN) 9913
155 6WVL 2 B, D Tubulin beta chain 9913
156 6WVM 2 B, D Tubulin beta chain 9913
157 6WVR 2 B, D Tubulin beta chain 9913
158 6VPO 2 B Tubulin beta chain 9823
159 6VPP 2 B Tubulin beta chain 9823
160 6VE7 5 4, 8, 9, I, J, K, N, O, Q, R, T, U, V, a, b, i, j, p, q, r, t, u, v, w Tubulin beta 3055
161 6TIW 2 B Tubulin beta chain 9823
162 6TA3 1 B Tubulin beta chain 9823
163 6TA4 1 B Tubulin beta chain 9823
164 6U42 1 0A, 0C, 0E, 0G, 0I, 0K, 0M, 0O, 0Q, 0S, 0U, 0W, 0Y, 1, 1A, 1C, 1E, 1G, 1K, 1M, 1O, 1Q, 1S, 1U, 1W, 2A, 2C, 2E, 2G, 2I, 2K, 2M, 2Q, 2S, 2U, 2W, 2Y, 3, 3A, 3C, 3G, 3I, 3K, 3M, 3O, 3Q, 3S, 5, 7, 9, A1, A3, A5, A7, A9, B1, B3, B5, B8, C0, C2, C4, C6, C8, D0, D2, D4, D6, D8, E0, E2, E4, E6, E8, F0, F2, F6, F8, G0, G2, G4, G6, G8, H2, H4, H6, H8, I0, I2, I4, I8, J0, J2, J4, J6, J8, K0, K4, K6, K8, L0, L2, L4, L6, M0, M2, M4, M6, M8, N0, N2, N6, N8, O0, O2, O4, O6, O8, P4, P6, P8, Q0, Q2, Q4, Q6, Q8, R0, R2, R4, R6, R8, S0, S2, S4, S6, S8, T0, T2, T4, T6, T8, U2, U4, U6, U8, V0, V2, V4, V6, V8, W0, W2, W4, W6, W8, X0, X2, X4, X6, X8, Y0, Y2, Y4, Y6, Y8, Z0, Z2, Z4, Z6, Z8 Tubulin beta 3055
165 6U0H 2 B Tubulin beta chain 5911 1.1.1.381 | Details
166 6U0T 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
167 6U0U 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
168 6SES 2 B, D Tubulin beta-2B chain 9913
169 6KIO 1 b Tubulin beta chain 9823
170 6KIQ 2 b Tubulin beta chain 9823
171 6S8M 2 B Tubulin beta chain 4896
172 6RZA 3 B, D Tubulin beta chain 9823
173 6RZB 2 B Tubulin beta chain 9823
174 6OJQ 1 B Tubulin beta-2B chain 9913
175 6REV 2 B, b Tubulin beta-2B chain 9913
176 6RF2 2 B, b Tubulin beta-2B chain 9913
177 6RF8 2 B, b Tubulin beta-2B chain 9913
178 6RFD 2 B, b Tubulin beta-2B chain 9913
179 6QVJ 3 S, U Tubulin beta chain GDP Taxol 9606
180 6QVE 3 G, H Beta1-tubulin GDP Taxol 9606
181 6QUS 3 S, U Tubulin beta chain GDP Taxol 9606
182 6QUY 3 G, H Tubulin beta chain GDP Taxol 9606
183 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
184 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
185 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
186 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
187 6I2I 2 B Tubulin beta chain Beta1-tubulin 9606
188 6MLQ 2 B Tubulin beta chain 9823
189 6MLR 2 B Tubulin beta chain 9823
190 6E88 2 B, D, J, K, N, O Tubulin beta-2 chain 6239
191 6E7B 1 B Tubulin beta-3 chain 9606
192 6E7C 1 B Tubulin beta-2B chain 9606
193 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
194 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
195 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
196 6CVJ 2 B, C Tubulin beta chain 9823
197 6CVN 1 A, C Tubulin beta chain 9823
198 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
199 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
200 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
201 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
202 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
203 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
204 6B0C 2 B, D Tubulin beta chain 9823
205 6B0I 3 B Tubulin beta chain 9823
206 6B0L 2 B Tubulin beta chain 9823
207 5OGC 3 B Tubulin beta chain 9823
208 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
209 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
210 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
211 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
212 5OCU 3 B Tubulin beta chain 9823
213 5OAM 3 B Tubulin beta chain 9823
214 5W3F 2 B Tubulin beta chain 4932
215 5W3H 2 B Tubulin beta chain 4932
216 5W3J 2 B Tubulin beta chain 4932
217 5ND2 3 B Tubulin beta-2B chain 9913
218 5ND3 3 B Tubulin beta-2B chain 9913
219 5ND4 3 B Tubulin beta-2B chain 9913
220 5ND7 3 B Tubulin beta-2B chain 9913
221 5N5N 1 A, B, C, D, E, F Tubulin beta chain GMPCPP (GTP-analogue) bound 9606
222 5UCY 2 B Tubulin beta chain 5911 1.1.1.381 | Details
223 5UBQ 2 B, D, F Tubulin beta chain 5911 1.1.1.381 | Details
224 5MM4 3 B Tubulin beta chain 9823
225 5MM7 3 B Tubulin beta chain 9823
226 5MLV 3 C, F, I, L, N, R Tubulin beta chain 4896
227 5MJS 1 A, B, C, J Tubulin beta chain 4896
228 5M5N 2 B Tubulin beta-2B chain 9913
229 5M5O 2 B Tubulin beta-2B chain 9913
230 5M5C 3 B, E Tubulin beta-2B chain 9913
231 5M5I 2 B Tubulin beta-2B chain 9913
232 5M5L 2 B Tubulin beta-2B chain 9913
233 5M5M 2 B Tubulin beta-2B chain 9913
234 5M50 2 B, E Tubulin beta-2B chain 9913
235 5M54 3 B, E Tubulin beta-2B chain 9913
236 5SYF 2 B Tubulin beta chain 9823
237 5SYG 2 B Tubulin beta chain 9823
238 5SYC 2 B Tubulin beta chain 9823
239 5SYE 2 B Tubulin beta chain 9823
240 5KMG 2 B Tubulin beta chain 9823
241 5JCO 1 C, D, I, J, K, L Tubulin beta-3 chain 9606
242 5IJ0 2 B Tubulin beta-3 chain 9606
243 5IJ9 2 B Tubulin beta-3 chain 9606
244 5HNW 2 B Tubulin beta-2B chain 9913
245 5HNX 2 B Tubulin beta-2B chain 9913
246 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
247 5HNZ 2 B Tubulin beta-2B chain 9913
248 3JAW 2 B, D Tubulin beta chain 9823
249 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
250 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
251 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
252 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
253 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
254 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
255 3J8X 3 B Tubulin beta-2B chain 9823
256 3J8Y 3 B Tubulin beta-2B chain 9823
257 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
258 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
259 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
260 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
261 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
262 4UXY 2 B BETA TUBULIN 9913
263 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
264 3J7I 2 B Tubulin beta chain 9823
265 3J6P 3 B Tubulin beta chain 9823
266 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
267 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
268 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
269 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
270 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
271 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
272 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
273 3J2U 3 B, D Tubulin beta-2B chain 9913
274 3J1T 3 C Tubulin beta-2B chain 9913
275 3J1U 3 C Tubulin beta-2B chain 9913
276 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
277 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
278 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
279 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
280 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
281 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
282 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
283 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
284 3EDL 2 B, G Beta tubulin 9913
285 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
286 2P4N 3 B Tubulin beta chain 9913
287 2HXF 2 B Tubulin beta chain 9823
288 2HXH 2 B Tubulin beta chain 9823
289 1TVK 2 B Tubulin beta chain see REMARK 400 9913
290 1JFF 2 B tubulin beta chain 9913
291 1IA0 2 B TUBULIN BETA CHAIN 9823
292 1TUB 2 B TUBULIN 9823