3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 179 40
95 % 239 278 11
90 % 242 281 14
70 % 258 297 15
50 % 258 297 18
40 % 516 594 4
30 % 527 605 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 58
95 % 237 275 13
90 % 250 288 9
70 % 259 297 14
50 % 259 297 17
40 % 517 594 4
30 % 528 605 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18199
95 % 3 3 16401
90 % 3 3 16079
70 % 3 3 13725
50 % 3 3 12527
40 % 3 3 11729
30 % 3 3 11765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 2 B Tubulin beta-2B chain 9913
2 5IYZ 2 B, D Tubulin beta-2B chain 9913
3 4I4T 2 B, D Tubulin beta-2B chain 9913
4 5NQU 2 B Tubulin beta-2B chain 9913
5 5LXT 2 B, D Tubulin beta-2B chain 9913
6 5EYP 2 B Tubulin beta chain 9940
7 6QTN 2 B, D Tubulin beta-2B chain 9913
8 6S8L 2 B Tubulin beta-3 chain 9606
9 4IHJ 2 B, D Tubulin beta-2B chain 9913
10 4TV9 2 B, D Tubulin beta-2B chain 9913
11 5M7E 2 B, D Tubulin beta-2B chain 9913
12 3RYC 2 B, D Tubulin beta chain 9940
13 5EZY 2 B, D Tubulin beta-2B chain 9913
14 4LNU 2 B Tubulin beta chain 9940
15 5EIB 2 D Tubulin beta-2B chain 9913
16 6FKL 2 B, D Tubulin beta-2B chain 9913
17 6FJM 2 B, D Tubulin beta-2B chain 9913
18 5M8G 2 B, D Tubulin beta-2B chain 9913
19 5NM5 2 B Tubulin beta-2B chain 9913
20 5NFZ 2 B, D Tubulin beta-2B chain 9913
21 4TUY 2 B, D Tubulin beta-2B chain 9913
22 4DRX 2 B, D Tubulin beta chain UNP residues 1-431 9940
23 6FKJ 2 B, D Tubulin beta-2B chain 9913
24 5LA6 2 B, D Tubulin beta-2B chain 9913
25 6F7C 2 B, D Tubulin beta-2B chain 9913
26 4I55 2 B, D Tubulin beta-2B chain 9913
27 4TV8 2 B, D Tubulin beta-2B chain 9913
28 5NQT 2 B Tubulin beta-2B chain 9913
29 4O4H 2 B, D Tubulin beta-2B chain 9913
30 5NG1 2 B, D Tubulin beta-2B chain 9913
31 5OSK 2 B, D Tubulin beta-2B chain 9913
32 5ITZ 2 B Tubulin beta-2B chain 9913
33 5M8D 2 B, D Tubulin beta-2B chain 9913
34 5M7G 2 B, D Tubulin beta-2B chain 9913
35 6Y6D 2 B, D Tubulin beta-2B chain 9913
36 5YL2 2 B, D Tubulin beta chain 9823
37 4O4L 2 B, D Tubulin beta-2B chain 9913
38 5LXS 2 B, D Tubulin beta-2B chain 9913
39 5JQG 2 B, D Tubulin beta chain 9823
40 5JH7 2 B, D Tubulin beta-2B chain 9913
41 5J2T 2 B, D Tubulin beta-2B chain 9913
42 5XKG 2 B, D Tubulin beta chain 9823
43 5JCB 2 B, D Tubulin beta chain 9823
44 4O2B 2 B, D Tubulin beta-2B chain 9913
45 4O4J 2 B, D Tubulin beta-2B chain 9913
46 5MF4 2 B, D Tubulin beta-2B chain 9913
47 3RYI 2 B, D Tubulin beta chain 9940
48 5CB4 2 B, D Tubulin beta 41807
49 5JVD 2 B, D Tubulin beta-2B chain 9913
50 5XKH 2 B, D Tubulin beta chain 9823
51 6FII 2 B, D Tubulin beta-2B chain 9913
52 6O5M 2 B, D Tubulin beta-2B chain 9823
53 5XP3 2 B, D Tubulin beta chain 9823
54 4I50 2 B, D Tubulin beta-2B chain 9913
55 6S9E 2 B, D Tubulin beta-2B chain 9913
56 6TDE 2 B, D Tubulin beta chain 9940
57 6BR1 2 B, D Tubulin beta-2B chain 9823
58 6QQN 2 B, D Tubulin beta-2B chain 9913
59 3RYF 2 B, D Tubulin beta chain 9940
60 4O4I 2 B, D Tubulin beta-2B chain 9913
61 5LOV 2 B, D Tubulin beta-2B chain 9913
62 5LYJ 2 B, D Tubulin beta-2B chain 9913
63 5OV7 2 B, D Tubulin beta-2B chain 9913
64 6NNG 2 B, D Tubulin beta-2B chain 9823
65 5CA1 2 B, D Tubulin beta-2 chain 9031
66 4ZOL 2 B, D Tubulin beta chain 9823
67 5XLZ 2 B, D Tubulin beta-2B chain 9913
68 6HX8 2 B, D Tubulin beta-2B chain 9913
69 6GJ4 2 B, D Tubulin beta-2B chain 9913
70 6GF3 2 B Tubulin beta-2B chain 9913
71 6GF3 3 D Tubulin beta-2B chain 9913
72 4ZI7 2 B, D Tubulin beta chain 9823
73 6FJF 2 B, D Tubulin beta-2B chain 9913
74 5BMV 2 B, D Tubulin beta chain 9823
75 6BRF 2 B, D Tubulin beta-2B chain 9823
76 6EG5 2 B, D Tubulin beta-2B chain 9913
77 6GWC 2 B Tubulin beta chain 9940
78 4O2A 2 B, D Tubulin beta-2B chain 9913
79 4F6R 2 B Tubulin beta chain 9940
80 5KX5 2 B, D Tubulin beta chain 9940
81 4ZHQ 2 B, D Tubulin beta chain 9823
82 5CA0 2 B, D Uncharacterized protein 9823
83 5NJH 2 B, D Tubulin beta-2B chain 9913
84 7JFR 2 B, D Tubulin beta-2B chain 9913
85 5O7A 2 B, D Tubulin beta-2B chain 9913
86 5FNV 2 B, D TUBULIN BETA CHAIN 10116
87 5GON 2 B, D Tubulin beta-2B chain UNP RESIDUES 1-431 9913
88 6BS2 2 B, D Tubulin beta-2B chain 9823
89 6PC4 2 B, D Tubulin beta-2B chain 9823
90 4YJ2 2 B, D Tubulin beta-2B chain 9913
91 6H9B 2 B, D Tubulin beta chain 9940
92 3RYH 2 B, D Tubulin beta chain 9940
93 6GZE 2 B, D Tubulin beta-2B chain 9913
94 4IIJ 2 B, D Tubulin beta-2B chain 9913
95 5XAF 2 B, D Tubulin beta-2B chain 9913
96 5J2U 2 B, D Tubulin beta-2B chain 9913
97 6KNZ 2 B, D Tubulin beta-2B chain 9913
98 5YZ3 2 B, D Tubulin beta-2B chain 9913
99 5H74 2 B, D Tubulin beta-2B chain 9913
100 6N47 2 B, D Tubulin beta-2B chain 9913
101 3UT5 2 B, D Tubulin beta chain 9940
102 6O61 2 B, D Tubulin beta-2B chain 9823
103 5XAG 2 B, D Tubulin beta-2B chain 9913
104 6GVN 2 B Tubulin beta chain 9940
105 5Z4P 2 B, D Tubulin beta-2B chain UNP residues 1-425 9913
106 6BRY 2 B, D Tubulin beta-2B chain 9823
107 6K9V 2 B, D Tubulin beta-2B chain 9913
108 6KPP 2 B, D Tubulin beta chain 9823
109 6I5C 2 B, D Tubulin beta-2B chain 9913
110 5XKE 2 B, D Tubulin beta chain 9823
111 5C8Y 2 B, D Tubulin beta 41807
112 5YL4 2 B, D Tubulin beta chain 41807
113 6JCJ 2 B, D Tubulin beta-2B chain 9913
114 6D88 2 B, D Tubulin beta chain 9823
115 5YLJ 2 B, D Tubulin beta chain 9823
116 5XLT 2 B, D Tubulin beta-2B chain 9913
117 5ZXH 2 B, D Tubulin beta-2B chain 9913
118 5XKF 2 B, D Tubulin beta chain 9823
119 6AGK 2 B, D Tubulin beta-2B chain 9913
120 5H7O 2 B, D Tubulin beta-2B chain 9913
121 5XIW 2 B, D Tubulin beta chain 9823
122 6GX7 2 B, D Tubulin beta chain 9940
123 4FFB 2 B Tubulin beta chain 4932 3.6.5.6 | Details
124 4U3J 2 B Tubulin beta chain 4932
125 4HNA 2 B Tubulin beta chain 9940
126 5XHC 2 B, D Tubulin beta chain 41807
127 6MZG 2 B, D, H, J Tubulin beta chain 9823
128 6O5N 2 B, D Tubulin beta-2B chain 9823
129 4X1I 2 B, D Tubulin beta chain 9940
130 5XI5 2 B, D Tubulin beta chain 41807
131 5Z4U 2 B, D Tubulin beta-2B chain 9913
132 5YLS 2 B, D Tubulin beta chain 9823
133 4X1Y 2 B, D Tubulin beta chain 9940
134 5XI7 2 B, D Tubulin beta chain 41807
135 4X20 2 B, D Tubulin beta chain 9940
136 5MIO 2 B Tubulin beta chain 9940
137 4X1K 2 B, D Tubulin beta chain 9940
138 6GWD 2 B, D, F Tubulin beta chain 9940
139 4EB6 2 B, D Tubulin beta chain 9940
140 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
141 5LP6 2 B, D Tubulin beta-2B chain 9913
142 3HKE 2 B, D Tubulin beta chain 9940
143 3HKB 2 B, D Tubulin beta chain 9940
144 3HKD 2 B, D Tubulin beta chain 9940
145 3HKC 2 B, D Tubulin beta chain 9940
146 1SA0 2 B, D Tubulin beta chain 9913
147 6BBN 2 B, D Tubulin beta-2B chain 9913
148 3N2G 2 B, D Tubulin beta chain 9940
149 6GVM 2 B Tubulin beta chain 9940
150 3E22 2 B, D Tubulin beta-2B chain 9913
151 1SA1 2 B, D Tubulin beta chain 9913
152 1Z2B 2 B, D Tubulin beta chain 9913
153 3DU7 2 B, D Tubulin beta-2B chain 9913
154 3N2K 2 B, D Tubulin beta chain 9940
155 4YJ3 2 B, D Tubulin beta-2B chain 9913
156 4F61 2 B, D, F, H Tubulin beta chain 9940
157 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
158 1FFX 2 B, D PROTEIN (TUBULIN) 9913
159 6WVL 2 B, D Tubulin beta chain 9913
160 6WVM 2 B, D Tubulin beta chain 9913
161 6WVR 2 B, D Tubulin beta chain 9913
162 6WSL 2 B, F Tubulin beta-3 chain 9606
163 6VPO 2 B Tubulin beta chain 9823
164 6VPP 2 B Tubulin beta chain 9823
165 6VE7 5 4, 8, 9, I, J, K, N, O, Q, R, T, U, V, a, b, i, j, p, q, r, t, u, v, w Tubulin beta 3055
166 6TIW 2 B Tubulin beta chain 9823
167 6TA3 1 B Tubulin beta chain 9823
168 6TA4 1 B Tubulin beta chain 9823
169 6U42 1 0A, 0C, 0E, 0G, 0I, 0K, 0M, 0O, 0Q, 0S, 0U, 0W, 0Y, 1, 1A, 1C, 1E, 1G, 1K, 1M, 1O, 1Q, 1S, 1U, 1W, 2A, 2C, 2E, 2G, 2I, 2K, 2M, 2Q, 2S, 2U, 2W, 2Y, 3, 3A, 3C, 3G, 3I, 3K, 3M, 3O, 3Q, 3S, 5, 7, 9, A1, A3, A5, A7, A9, B1, B3, B5, B8, C0, C2, C4, C6, C8, D0, D2, D4, D6, D8, E0, E2, E4, E6, E8, F0, F2, F6, F8, G0, G2, G4, G6, G8, H2, H4, H6, H8, I0, I2, I4, I8, J0, J2, J4, J6, J8, K0, K4, K6, K8, L0, L2, L4, L6, M0, M2, M4, M6, M8, N0, N2, N6, N8, O0, O2, O4, O6, O8, P4, P6, P8, Q0, Q2, Q4, Q6, Q8, R0, R2, R4, R6, R8, S0, S2, S4, S6, S8, T0, T2, T4, T6, T8, U2, U4, U6, U8, V0, V2, V4, V6, V8, W0, W2, W4, W6, W8, X0, X2, X4, X6, X8, Y0, Y2, Y4, Y6, Y8, Z0, Z2, Z4, Z6, Z8 Tubulin beta 3055
170 6U0H 2 B Tubulin beta chain 5911 1.1.1.381 | Details
171 6U0T 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
172 6U0U 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
173 6SES 2 B, D Tubulin beta-2B chain 9913
174 6KIO 1 b Tubulin beta chain 9823
175 6KIQ 2 b Tubulin beta chain 9823
176 6S8M 2 B Tubulin beta chain 4896
177 6RZA 3 B, D Tubulin beta chain 9823
178 6RZB 2 B Tubulin beta chain 9823
179 6OJQ 1 B Tubulin beta-2B chain 9913
180 6REV 2 B, b Tubulin beta-2B chain 9913
181 6RF2 2 B, b Tubulin beta-2B chain 9913
182 6RF8 2 B, b Tubulin beta-2B chain 9913
183 6RFD 2 B, b Tubulin beta-2B chain 9913
184 6QVJ 3 S, U Tubulin beta chain GDP Taxol 9606
185 6QVE 3 G, H Beta1-tubulin GDP Taxol 9606
186 6QUS 3 S, U Tubulin beta chain GDP Taxol 9606
187 6QUY 3 G, H Tubulin beta chain GDP Taxol 9606
188 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
189 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
190 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
191 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
192 6I2I 2 B Tubulin beta chain Beta1-tubulin 9606
193 6MLQ 2 B Tubulin beta chain 9823
194 6MLR 2 B Tubulin beta chain 9823
195 6E88 2 B, D, J, K, N, O Tubulin beta-2 chain 6239
196 6E7B 1 B Tubulin beta-3 chain 9606
197 6E7C 1 B Tubulin beta-2B chain 9606
198 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
199 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
200 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
201 6CVJ 2 B, C Tubulin beta chain 9823
202 6CVN 1 A, C Tubulin beta chain 9823
203 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
204 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
205 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
206 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
207 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
208 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
209 6B0C 2 B, D Tubulin beta chain 9823
210 6B0I 3 B Tubulin beta chain 9823
211 6B0L 2 B Tubulin beta chain 9823
212 5OGC 3 B Tubulin beta chain 9823
213 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
214 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
215 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
216 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
217 5OCU 3 B Tubulin beta chain 9823
218 5OAM 3 B Tubulin beta chain 9823
219 5W3F 2 B Tubulin beta chain 4932
220 5W3H 2 B Tubulin beta chain 4932
221 5W3J 2 B Tubulin beta chain 4932
222 5ND2 3 B Tubulin beta-2B chain 9913
223 5ND3 3 B Tubulin beta-2B chain 9913
224 5ND4 3 B Tubulin beta-2B chain 9913
225 5ND7 3 B Tubulin beta-2B chain 9913
226 5N5N 1 A, B, C, D, E, F Tubulin beta chain GMPCPP (GTP-analogue) bound 9606
227 5UCY 2 B Tubulin beta chain 5911 1.1.1.381 | Details
228 5UBQ 2 B, D, F Tubulin beta chain 5911 1.1.1.381 | Details
229 5MM4 3 B Tubulin beta chain 9823
230 5MM7 3 B Tubulin beta chain 9823
231 5MLV 3 C, F, I, L, N, R Tubulin beta chain 4896
232 5MJS 1 A, B, C, J Tubulin beta chain 4896
233 5M5N 2 B Tubulin beta-2B chain 9913
234 5M5O 2 B Tubulin beta-2B chain 9913
235 5M5C 3 B, E Tubulin beta-2B chain 9913
236 5M5I 2 B Tubulin beta-2B chain 9913
237 5M5L 2 B Tubulin beta-2B chain 9913
238 5M5M 2 B Tubulin beta-2B chain 9913
239 5M50 2 B, E Tubulin beta-2B chain 9913
240 5M54 3 B, E Tubulin beta-2B chain 9913
241 5SYF 2 B Tubulin beta chain 9823
242 5SYG 2 B Tubulin beta chain 9823
243 5SYC 2 B Tubulin beta chain 9823
244 5SYE 2 B Tubulin beta chain 9823
245 5KMG 2 B Tubulin beta chain 9823
246 5JCO 1 C, D, I, J, K, L Tubulin beta-3 chain 9606
247 5IJ0 2 B Tubulin beta-3 chain 9606
248 5IJ9 2 B Tubulin beta-3 chain 9606
249 5HNW 2 B Tubulin beta-2B chain 9913
250 5HNX 2 B Tubulin beta-2B chain 9913
251 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
252 5HNZ 2 B Tubulin beta-2B chain 9913
253 3JAW 2 B, D Tubulin beta chain 9823
254 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
255 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
256 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
257 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
258 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
259 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
260 3J8X 3 B Tubulin beta-2B chain 9823
261 3J8Y 3 B Tubulin beta-2B chain 9823
262 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
263 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
264 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
265 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
266 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
267 4UXY 2 B BETA TUBULIN 9913
268 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
269 3J7I 2 B Tubulin beta chain 9823
270 3J6P 3 B Tubulin beta chain 9823
271 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
272 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
273 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
274 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
275 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
276 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
277 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
278 3J2U 3 B, D Tubulin beta-2B chain 9913
279 3J1T 3 C Tubulin beta-2B chain 9913
280 3J1U 3 C Tubulin beta-2B chain 9913
281 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
282 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
283 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
284 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
285 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
286 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
287 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
288 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
289 3EDL 2 B, G Beta tubulin 9913
290 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
291 2P4N 3 B Tubulin beta chain 9913
292 2HXF 2 B Tubulin beta chain 9823
293 2HXH 2 B Tubulin beta chain 9823
294 1TVK 2 B Tubulin beta chain see REMARK 400 9913
295 1JFF 2 B tubulin beta chain 9913
296 1IA0 2 B TUBULIN BETA CHAIN 9823
297 1TUB 2 B TUBULIN 9823