3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 174 176 41
95 % 235 274 12
90 % 238 277 13
70 % 254 293 14
50 % 254 293 18
40 % 508 586 3
30 % 519 597 7
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 116 56
95 % 234 272 14
90 % 247 285 7
70 % 255 293 13
50 % 255 293 17
40 % 509 586 3
30 % 520 597 7
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15679
95 % 3 3 16296
90 % 3 3 15994
70 % 3 3 14980
50 % 3 3 13556
40 % 3 3 12618
30 % 3 3 11574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 2 B Tubulin beta-2B chain 9913
2 5IYZ 2 B, D Tubulin beta-2B chain 9913
3 4I4T 2 B, D Tubulin beta-2B chain 9913
4 5NQU 2 B Tubulin beta-2B chain 9913
5 5LXT 2 B, D Tubulin beta-2B chain 9913
6 5EYP 2 B Tubulin beta chain 9940
7 6QTN 2 B, D Tubulin beta-2B chain 9913
8 6S8L 2 B Tubulin beta-3 chain 9606
9 4IHJ 2 B, D Tubulin beta-2B chain 9913
10 4TV9 2 B, D Tubulin beta-2B chain 9913
11 5M7E 2 B, D Tubulin beta-2B chain 9913
12 3RYC 2 B, D Tubulin beta chain 9940
13 5EZY 2 B, D Tubulin beta-2B chain 9913
14 4LNU 2 B Tubulin beta chain 9940
15 5EIB 2 D Tubulin beta-2B chain 9913
16 6FKL 2 B, D Tubulin beta-2B chain 9913
17 6FJM 2 B, D Tubulin beta-2B chain 9913
18 5M8G 2 B, D Tubulin beta-2B chain 9913
19 5NM5 2 B Tubulin beta-2B chain 9913
20 5NFZ 2 B, D Tubulin beta-2B chain 9913
21 4TUY 2 B, D Tubulin beta-2B chain 9913
22 4DRX 2 B, D Tubulin beta chain UNP residues 1-431 9940
23 6FKJ 2 B, D Tubulin beta-2B chain 9913
24 5LA6 2 B, D Tubulin beta-2B chain 9913
25 6F7C 2 B, D Tubulin beta-2B chain 9913
26 4I55 2 B, D Tubulin beta-2B chain 9913
27 4TV8 2 B, D Tubulin beta-2B chain 9913
28 5NQT 2 B Tubulin beta-2B chain 9913
29 4O4H 2 B, D Tubulin beta-2B chain 9913
30 5NG1 2 B, D Tubulin beta-2B chain 9913
31 5OSK 2 B, D Tubulin beta-2B chain 9913
32 5ITZ 2 B Tubulin beta-2B chain 9913
33 5M8D 2 B, D Tubulin beta-2B chain 9913
34 5M7G 2 B, D Tubulin beta-2B chain 9913
35 6Y6D 2 B, D Tubulin beta-2B chain 9913
36 5YL2 2 B, D Tubulin beta chain 9823
37 4O4L 2 B, D Tubulin beta-2B chain 9913
38 5LXS 2 B, D Tubulin beta-2B chain 9913
39 5JQG 2 B, D Tubulin beta chain 9823
40 5JH7 2 B, D Tubulin beta-2B chain 9913
41 5J2T 2 B, D Tubulin beta-2B chain 9913
42 5XKG 2 B, D Tubulin beta chain 9823
43 5JCB 2 B, D Tubulin beta chain 9823
44 4O2B 2 B, D Tubulin beta-2B chain 9913
45 4O4J 2 B, D Tubulin beta-2B chain 9913
46 5MF4 2 B, D Tubulin beta-2B chain 9913
47 3RYI 2 B, D Tubulin beta chain 9940
48 5CB4 2 B, D Tubulin beta 41807
49 5JVD 2 B, D Tubulin beta-2B chain 9913
50 5XKH 2 B, D Tubulin beta chain 9823
51 6FII 2 B, D Tubulin beta-2B chain 9913
52 6O5M 2 B, D Tubulin beta-2B chain 9823
53 5XP3 2 B, D Tubulin beta chain 9823
54 4I50 2 B, D Tubulin beta-2B chain 9913
55 6S9E 2 B, D Tubulin beta-2B chain 9913
56 6BR1 2 B, D Tubulin beta-2B chain 9823
57 6QQN 2 B, D Tubulin beta-2B chain 9913
58 3RYF 2 B, D Tubulin beta chain 9940
59 4O4I 2 B, D Tubulin beta-2B chain 9913
60 5LOV 2 B, D Tubulin beta-2B chain 9913
61 5LYJ 2 B, D Tubulin beta-2B chain 9913
62 5OV7 2 B, D Tubulin beta-2B chain 9913
63 6NNG 2 B, D Tubulin beta-2B chain 9823
64 5CA1 2 B, D Tubulin beta-2 chain 9031
65 4ZOL 2 B, D Tubulin beta chain 9823
66 5XLZ 2 B, D Tubulin beta-2B chain 9913
67 6HX8 2 B, D Tubulin beta-2B chain 9913
68 6GJ4 2 B, D Tubulin beta-2B chain 9913
69 6GF3 2 B Tubulin beta-2B chain 9913
70 6GF3 3 D Tubulin beta-2B chain 9913
71 4ZI7 2 B, D Tubulin beta chain 9823
72 6FJF 2 B, D Tubulin beta-2B chain 9913
73 5BMV 2 B, D Tubulin beta chain 9823
74 6BRF 2 B, D Tubulin beta-2B chain 9823
75 6EG5 2 B, D Tubulin beta-2B chain 9913
76 6GWC 2 B Tubulin beta chain 9940
77 4O2A 2 B, D Tubulin beta-2B chain 9913
78 4F6R 2 B Tubulin beta chain 9940
79 5KX5 2 B, D Tubulin beta chain 9940
80 4ZHQ 2 B, D Tubulin beta chain 9823
81 5CA0 2 B, D Uncharacterized protein 9823
82 5NJH 2 B, D Tubulin beta-2B chain 9913
83 5O7A 2 B, D Tubulin beta-2B chain 9913
84 5FNV 2 B, D TUBULIN BETA CHAIN 10116
85 5GON 2 B, D Tubulin beta-2B chain UNP RESIDUES 1-431 9913
86 6BS2 2 B, D Tubulin beta-2B chain 9823
87 6PC4 2 B, D Tubulin beta-2B chain 9823
88 4YJ2 2 B, D Tubulin beta-2B chain 9913
89 6H9B 2 B, D Tubulin beta chain 9940
90 3RYH 2 B, D Tubulin beta chain 9940
91 6GZE 2 B, D Tubulin beta-2B chain 9913
92 4IIJ 2 B, D Tubulin beta-2B chain 9913
93 5XAF 2 B, D Tubulin beta-2B chain 9913
94 5J2U 2 B, D Tubulin beta-2B chain 9913
95 6KNZ 2 B, D Tubulin beta-2B chain 9913
96 5YZ3 2 B, D Tubulin beta-2B chain 9913
97 5H74 2 B, D Tubulin beta-2B chain 9913
98 6N47 2 B, D Tubulin beta-2B chain 9913
99 3UT5 2 B, D Tubulin beta chain 9940
100 6O61 2 B, D Tubulin beta-2B chain 9823
101 5XAG 2 B, D Tubulin beta-2B chain 9913
102 6GVN 2 B Tubulin beta chain 9940
103 5Z4P 2 B, D Tubulin beta-2B chain UNP residues 1-425 9913
104 6BRY 2 B, D Tubulin beta-2B chain 9823
105 6K9V 2 B, D Tubulin beta-2B chain 9913
106 6I5C 2 B, D Tubulin beta-2B chain 9913
107 5XKE 2 B, D Tubulin beta chain 9823
108 5C8Y 2 B, D Tubulin beta 41807
109 5YL4 2 B, D Tubulin beta chain 41807
110 6JCJ 2 B, D Tubulin beta-2B chain 9913
111 6D88 2 B, D Tubulin beta chain 9823
112 5YLJ 2 B, D Tubulin beta chain 9823
113 5XLT 2 B, D Tubulin beta-2B chain 9913
114 5ZXH 2 B, D Tubulin beta-2B chain 9913
115 5XKF 2 B, D Tubulin beta chain 9823
116 6AGK 2 B, D Tubulin beta-2B chain 9913
117 5H7O 2 B, D Tubulin beta-2B chain 9913
118 5XIW 2 B, D Tubulin beta chain 9823
119 6GX7 2 B, D Tubulin beta chain 9940
120 4FFB 2 B Tubulin beta chain 4932 3.6.5.6 | Details
121 4U3J 2 B Tubulin beta chain 4932
122 4HNA 2 B Tubulin beta chain 9940
123 5XHC 2 B, D Tubulin beta chain 41807
124 6MZG 2 B, D, H, J Tubulin beta chain 9823
125 6O5N 2 B, D Tubulin beta-2B chain 9823
126 4X1I 2 B, D Tubulin beta chain 9940
127 5XI5 2 B, D Tubulin beta chain 41807
128 5Z4U 2 B, D Tubulin beta-2B chain 9913
129 5YLS 2 B, D Tubulin beta chain 9823
130 4X1Y 2 B, D Tubulin beta chain 9940
131 5XI7 2 B, D Tubulin beta chain 41807
132 4X20 2 B, D Tubulin beta chain 9940
133 5MIO 2 B Tubulin beta chain 9940
134 4X1K 2 B, D Tubulin beta chain 9940
135 6GWD 2 B, D, F Tubulin beta chain 9940
136 4EB6 2 B, D Tubulin beta chain 9940
137 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
138 5LP6 2 B, D Tubulin beta-2B chain 9913
139 3HKE 2 B, D Tubulin beta chain 9940
140 3HKB 2 B, D Tubulin beta chain 9940
141 3HKD 2 B, D Tubulin beta chain 9940
142 3HKC 2 B, D Tubulin beta chain 9940
143 1SA0 2 B, D Tubulin beta chain 9913
144 6BBN 2 B, D Tubulin beta-2B chain 9913
145 3N2G 2 B, D Tubulin beta chain 9940
146 6GVM 2 B Tubulin beta chain 9940
147 3E22 2 B, D Tubulin beta-2B chain 9913
148 1SA1 2 B, D Tubulin beta chain 9913
149 1Z2B 2 B, D Tubulin beta chain 9913
150 3DU7 2 B, D Tubulin beta-2B chain 9913
151 3N2K 2 B, D Tubulin beta chain 9940
152 4YJ3 2 B, D Tubulin beta-2B chain 9913
153 4F61 2 B, D, F, H Tubulin beta chain 9940
154 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
155 1FFX 2 B, D PROTEIN (TUBULIN) 9913
156 6WVL 2 B, D Tubulin beta chain 9913
157 6WVM 2 B, D Tubulin beta chain 9913
158 6WVR 2 B, D Tubulin beta chain 9913
159 6VPO 2 B Tubulin beta chain 9823
160 6VPP 2 B Tubulin beta chain 9823
161 6VE7 5 4, 8, 9, I, J, K, N, O, Q, R, T, U, V, a, b, i, j, p, q, r, t, u, v, w Tubulin beta 3055
162 6TIW 2 B Tubulin beta chain 9823
163 6TA3 1 B Tubulin beta chain 9823
164 6TA4 1 B Tubulin beta chain 9823
165 6U42 1 0A, 0C, 0E, 0G, 0I, 0K, 0M, 0O, 0Q, 0S, 0U, 0W, 0Y, 1, 1A, 1C, 1E, 1G, 1K, 1M, 1O, 1Q, 1S, 1U, 1W, 2A, 2C, 2E, 2G, 2I, 2K, 2M, 2Q, 2S, 2U, 2W, 2Y, 3, 3A, 3C, 3G, 3I, 3K, 3M, 3O, 3Q, 3S, 5, 7, 9, A1, A3, A5, A7, A9, B1, B3, B5, B8, C0, C2, C4, C6, C8, D0, D2, D4, D6, D8, E0, E2, E4, E6, E8, F0, F2, F6, F8, G0, G2, G4, G6, G8, H2, H4, H6, H8, I0, I2, I4, I8, J0, J2, J4, J6, J8, K0, K4, K6, K8, L0, L2, L4, L6, M0, M2, M4, M6, M8, N0, N2, N6, N8, O0, O2, O4, O6, O8, P4, P6, P8, Q0, Q2, Q4, Q6, Q8, R0, R2, R4, R6, R8, S0, S2, S4, S6, S8, T0, T2, T4, T6, T8, U2, U4, U6, U8, V0, V2, V4, V6, V8, W0, W2, W4, W6, W8, X0, X2, X4, X6, X8, Y0, Y2, Y4, Y6, Y8, Z0, Z2, Z4, Z6, Z8 Tubulin beta 3055
166 6U0H 2 B Tubulin beta chain 5911 1.1.1.381 | Details
167 6U0T 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
168 6U0U 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
169 6SES 2 B, D Tubulin beta-2B chain 9913
170 6KIO 1 b Tubulin beta chain 9823
171 6KIQ 2 b Tubulin beta chain 9823
172 6S8M 2 B Tubulin beta chain 4896
173 6RZA 3 B, D Tubulin beta chain 9823
174 6RZB 2 B Tubulin beta chain 9823
175 6OJQ 1 B Tubulin beta-2B chain 9913
176 6REV 2 B, b Tubulin beta-2B chain 9913
177 6RF2 2 B, b Tubulin beta-2B chain 9913
178 6RF8 2 B, b Tubulin beta-2B chain 9913
179 6RFD 2 B, b Tubulin beta-2B chain 9913
180 6QVJ 3 S, U Tubulin beta chain GDP Taxol 9606
181 6QVE 3 G, H Beta1-tubulin GDP Taxol 9606
182 6QUS 3 S, U Tubulin beta chain GDP Taxol 9606
183 6QUY 3 G, H Tubulin beta chain GDP Taxol 9606
184 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
185 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
186 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
187 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
188 6I2I 2 B Tubulin beta chain Beta1-tubulin 9606
189 6MLQ 2 B Tubulin beta chain 9823
190 6MLR 2 B Tubulin beta chain 9823
191 6E88 2 B, D, J, K, N, O Tubulin beta-2 chain 6239
192 6E7B 1 B Tubulin beta-3 chain 9606
193 6E7C 1 B Tubulin beta-2B chain 9606
194 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
195 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
196 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
197 6CVJ 2 B, C Tubulin beta chain 9823
198 6CVN 1 A, C Tubulin beta chain 9823
199 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
200 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
201 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
202 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
203 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
204 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
205 6B0C 2 B, D Tubulin beta chain 9823
206 6B0I 3 B Tubulin beta chain 9823
207 6B0L 2 B Tubulin beta chain 9823
208 5OGC 3 B Tubulin beta chain 9823
209 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
210 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
211 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
212 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
213 5OCU 3 B Tubulin beta chain 9823
214 5OAM 3 B Tubulin beta chain 9823
215 5W3F 2 B Tubulin beta chain 4932
216 5W3H 2 B Tubulin beta chain 4932
217 5W3J 2 B Tubulin beta chain 4932
218 5ND2 3 B Tubulin beta-2B chain 9913
219 5ND3 3 B Tubulin beta-2B chain 9913
220 5ND4 3 B Tubulin beta-2B chain 9913
221 5ND7 3 B Tubulin beta-2B chain 9913
222 5N5N 1 A, B, C, D, E, F Tubulin beta chain GMPCPP (GTP-analogue) bound 9606
223 5UCY 2 B Tubulin beta chain 5911 1.1.1.381 | Details
224 5UBQ 2 B, D, F Tubulin beta chain 5911 1.1.1.381 | Details
225 5MM4 3 B Tubulin beta chain 9823
226 5MM7 3 B Tubulin beta chain 9823
227 5MLV 3 C, F, I, L, N, R Tubulin beta chain 4896
228 5MJS 1 A, B, C, J Tubulin beta chain 4896
229 5M5N 2 B Tubulin beta-2B chain 9913
230 5M5O 2 B Tubulin beta-2B chain 9913
231 5M5C 3 B, E Tubulin beta-2B chain 9913
232 5M5I 2 B Tubulin beta-2B chain 9913
233 5M5L 2 B Tubulin beta-2B chain 9913
234 5M5M 2 B Tubulin beta-2B chain 9913
235 5M50 2 B, E Tubulin beta-2B chain 9913
236 5M54 3 B, E Tubulin beta-2B chain 9913
237 5SYF 2 B Tubulin beta chain 9823
238 5SYG 2 B Tubulin beta chain 9823
239 5SYC 2 B Tubulin beta chain 9823
240 5SYE 2 B Tubulin beta chain 9823
241 5KMG 2 B Tubulin beta chain 9823
242 5JCO 1 C, D, I, J, K, L Tubulin beta-3 chain 9606
243 5IJ0 2 B Tubulin beta-3 chain 9606
244 5IJ9 2 B Tubulin beta-3 chain 9606
245 5HNW 2 B Tubulin beta-2B chain 9913
246 5HNX 2 B Tubulin beta-2B chain 9913
247 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
248 5HNZ 2 B Tubulin beta-2B chain 9913
249 3JAW 2 B, D Tubulin beta chain 9823
250 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
251 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
252 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
253 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
254 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
255 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
256 3J8X 3 B Tubulin beta-2B chain 9823
257 3J8Y 3 B Tubulin beta-2B chain 9823
258 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
259 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
260 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
261 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
262 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
263 4UXY 2 B BETA TUBULIN 9913
264 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
265 3J7I 2 B Tubulin beta chain 9823
266 3J6P 3 B Tubulin beta chain 9823
267 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
268 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
269 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
270 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
271 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
272 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
273 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
274 3J2U 3 B, D Tubulin beta-2B chain 9913
275 3J1T 3 C Tubulin beta-2B chain 9913
276 3J1U 3 C Tubulin beta-2B chain 9913
277 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
278 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
279 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
280 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
281 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
282 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
283 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
284 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
285 3EDL 2 B, G Beta tubulin 9913
286 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
287 2P4N 3 B Tubulin beta chain 9913
288 2HXF 2 B Tubulin beta chain 9823
289 2HXH 2 B Tubulin beta chain 9823
290 1TVK 2 B Tubulin beta chain see REMARK 400 9913
291 1JFF 2 B tubulin beta chain 9913
292 1IA0 2 B TUBULIN BETA CHAIN 9823
293 1TUB 2 B TUBULIN 9823