Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 156 43
95 % 209 248 12
90 % 210 249 15
70 % 224 263 21
50 % 224 263 41
40 % 448 526 8
30 % 456 534 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 76
95 % 207 245 13
90 % 217 255 13
70 % 225 263 20
50 % 225 263 39
40 % 449 526 8
30 % 457 534 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15752
95 % 3 3 13432
90 % 3 3 14622
70 % 3 3 12551
50 % 3 3 12674
40 % 3 3 11689
30 % 3 3 10725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5IYZ 2 B, D Tubulin beta-2B chain 9913
2 4I4T 2 B, D Tubulin beta-2B chain 9913
3 5NQU 2 B Tubulin beta-2B chain 9913
4 5LXT 2 B, D Tubulin beta-2B chain 9913
5 5EYP 2 B Tubulin beta chain 9940
6 6QTN 2 B, D Tubulin beta-2B chain 9913
7 4IHJ 2 B, D Tubulin beta-2B chain 9913
8 4TV9 2 B, D Tubulin beta-2B chain 9913
9 5M7E 2 B, D Tubulin beta-2B chain 9913
10 3RYC 2 B, D Tubulin beta chain 9940
11 5EZY 2 B, D Tubulin beta-2B chain 9913
12 4LNU 2 B Tubulin beta chain 9940
13 5EIB 2 D Tubulin beta-2B chain 9913
14 6FKL 2 B, D Tubulin beta-2B chain 9913
15 6FJM 2 B, D Tubulin beta-2B chain 9913
16 5M8G 2 B, D Tubulin beta-2B chain 9913
17 5NM5 2 B Tubulin beta-2B chain 9913
18 5NFZ 2 B, D Tubulin beta-2B chain 9913
19 4TUY 2 B, D Tubulin beta-2B chain 9913
20 4DRX 2 B, D Tubulin beta chain UNP residues 1-431 9940
21 6FKJ 2 B, D Tubulin beta-2B chain 9913
22 5LA6 2 B, D Tubulin beta-2B chain 9913
23 6F7C 2 B, D Tubulin beta-2B chain 9913
24 4I55 2 B, D Tubulin beta-2B chain 9913
25 4TV8 2 B, D Tubulin beta-2B chain 9913
26 5NQT 2 B Tubulin beta-2B chain 9913
27 4O4H 2 B, D Tubulin beta-2B chain 9913
28 5NG1 2 B, D Tubulin beta-2B chain 9913
29 5OSK 2 B, D Tubulin beta-2B chain 9913
30 5ITZ 2 B Tubulin beta-2B chain 9913
31 5M8D 2 B, D Tubulin beta-2B chain 9913
32 5M7G 2 B, D Tubulin beta-2B chain 9913
33 5YL2 2 B, D Tubulin beta chain 9823
34 4O4L 2 B, D Tubulin beta-2B chain 9913
35 5LXS 2 B, D Tubulin beta-2B chain 9913
36 5JQG 2 B, D Tubulin beta chain 9823
37 5JH7 2 B, D Tubulin beta-2B chain 9913
38 5J2T 2 B, D Tubulin beta-2B chain 9913
39 5XKG 2 B, D Tubulin beta chain 9823
40 5JCB 2 B, D Tubulin beta chain 9823
41 4O2B 2 B, D Tubulin beta-2B chain 9913
42 4O4J 2 B, D Tubulin beta-2B chain 9913
43 5MF4 2 B, D Tubulin beta-2B chain 9913
44 3RYI 2 B, D Tubulin beta chain 9940
45 5CB4 2 B, D Tubulin beta 41807
46 5JVD 2 B, D Tubulin beta-2B chain 9913
47 5XKH 2 B, D Tubulin beta chain 9823
48 6FII 2 B, D Tubulin beta-2B chain 9913
49 6O5M 2 B, D Tubulin beta-2B chain 9823
50 5XP3 2 B, D Tubulin beta chain 9823
51 4I50 2 B, D Tubulin beta-2B chain 9913
52 6BR1 2 B, D Tubulin beta-2B chain 9823
53 6QQN 2 B, D Tubulin beta-2B chain 9913
54 3RYF 2 B, D Tubulin beta chain 9940
55 4O4I 2 B, D Tubulin beta-2B chain 9913
56 5LOV 2 B, D Tubulin beta-2B chain 9913
57 5LYJ 2 B, D Tubulin beta-2B chain 9913
58 5OV7 2 B, D Tubulin beta-2B chain 9913
59 6NNG 2 B, D Tubulin beta-2B chain 9823
60 5CA1 2 B, D Tubulin beta-2 chain 9031
61 4ZOL 2 B, D Tubulin beta chain 9823
62 5XLZ 2 B, D Tubulin beta-2B chain 9913
63 6HX8 2 B, D Tubulin beta-2B chain 9913
64 6GJ4 2 B, D Tubulin beta-2B chain 9913
65 6GF3 2 B Tubulin beta-2B chain 9913
66 6GF3 3 D Tubulin beta-2B chain 9913
67 4ZI7 2 B, D Tubulin beta chain 9823
68 6FJF 2 B, D Tubulin beta-2B chain 9913
69 5BMV 2 B, D Tubulin beta chain 9823
70 6BRF 2 B, D Tubulin beta-2B chain 9823
71 6EG5 2 B, D Tubulin beta-2B chain 9913
72 6GWC 2 B Tubulin beta chain 9940
73 4O2A 2 B, D Tubulin beta-2B chain 9913
74 4F6R 2 B Tubulin beta chain 9940
75 5KX5 2 B, D Tubulin beta chain 9940
76 4ZHQ 2 B, D Tubulin beta chain 9823
77 5CA0 2 B, D Uncharacterized protein 9823
78 5NJH 2 B, D Tubulin beta-2B chain 9913
79 5O7A 2 B, D Tubulin beta-2B chain 9913
80 5FNV 2 B, D TUBULIN BETA CHAIN 10116
81 5GON 2 B, D Tubulin beta-2B chain UNP RESIDUES 1-431 9913
82 6BS2 2 B, D Tubulin beta-2B chain 9823
83 4YJ2 2 B, D Tubulin beta-2B chain 9913
84 6H9B 2 B, D Tubulin beta chain 9940
85 3RYH 2 B, D Tubulin beta chain 9940
86 4IIJ 2 B, D Tubulin beta-2B chain 9913
87 5XAF 2 B, D Tubulin beta-2B chain 9913
88 5J2U 2 B, D Tubulin beta-2B chain 9913
89 5YZ3 2 B, D Tubulin beta-2B chain 9913
90 5H74 2 B, D Tubulin beta-2B chain 9913
91 3UT5 2 B, D Tubulin beta chain 9940
92 6O61 2 B, D Tubulin beta-2B chain 9823
93 5XAG 2 B, D Tubulin beta-2B chain 9913
94 6GVN 2 B Tubulin beta chain 9940
95 5Z4P 2 B, D Tubulin beta-2B chain UNP residues 1-425 9913
96 6BRY 2 B, D Tubulin beta-2B chain 9823
97 6K9V 2 B, D Tubulin beta-2B chain 9913
98 6I5C 2 B, D Tubulin beta-2B chain 9913
99 5XKE 2 B, D Tubulin beta chain 9823
100 5C8Y 2 B, D Tubulin beta 41807
101 5YL4 2 B, D Tubulin beta chain 41807
102 6JCJ 2 B, D Tubulin beta-2B chain 9913
103 6D88 2 B, D Tubulin beta chain 9823
104 5YLJ 2 B, D Tubulin beta chain 9823
105 5XLT 2 B, D Tubulin beta-2B chain 9913
106 5ZXH 2 B, D Tubulin beta-2B chain 9913
107 5XKF 2 B, D Tubulin beta chain 9823
108 6AGK 2 B, D Tubulin beta-2B chain 9913
109 5H7O 2 B, D Tubulin beta-2B chain 9913
110 5XIW 2 B, D Tubulin beta chain 9823
111 6GX7 2 B, D Tubulin beta chain 9940
112 4FFB 2 B Tubulin beta chain 4932 3.6.5.6 | Details
113 4U3J 2 B Tubulin beta chain 4932
114 4HNA 2 B Tubulin beta chain 9940
115 5XHC 2 B, D Tubulin beta chain 41807
116 6MZG 2 B, D, H, J Tubulin beta chain 9823
117 6O5N 2 B, D Tubulin beta-2B chain 9823
118 4X1I 2 B, D Tubulin beta chain 9940
119 5XI5 2 B, D Tubulin beta chain 41807
120 5Z4U 2 B, D Tubulin beta-2B chain 9913
121 5YLS 2 B, D Tubulin beta chain 9823
122 4X1Y 2 B, D Tubulin beta chain 9940
123 5XI7 2 B, D Tubulin beta chain 41807
124 4X20 2 B, D Tubulin beta chain 9940
125 5MIO 2 B Tubulin beta chain 9940
126 4X1K 2 B, D Tubulin beta chain 9940
127 6GWD 2 B, D, F Tubulin beta chain 9940
128 4EB6 2 B, D Tubulin beta chain 9940
129 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
130 5LP6 2 B, D Tubulin beta-2B chain 9913
131 3HKE 2 B, D Tubulin beta chain 9940
132 3HKB 2 B, D Tubulin beta chain 9940
133 3HKD 2 B, D Tubulin beta chain 9940
134 3HKC 2 B, D Tubulin beta chain 9940
135 1SA0 2 B, D Tubulin beta chain 9913
136 6BBN 2 B, D Tubulin beta-2B chain 9913
137 3N2G 2 B, D Tubulin beta chain 9940
138 6GVM 2 B Tubulin beta chain 9940
139 3E22 2 B, D Tubulin beta-2B chain 9913
140 1SA1 2 B, D Tubulin beta chain 9913
141 1Z2B 2 B, D Tubulin beta chain 9913
142 3DU7 2 B, D Tubulin beta-2B chain 9913
143 3N2K 2 B, D Tubulin beta chain 9940
144 4YJ3 2 B, D Tubulin beta-2B chain 9913
145 4F61 2 B, D, F, H Tubulin beta chain 9940
146 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
147 1FFX 2 B, D PROTEIN (TUBULIN) 9913
148 6U0H 2 B Tubulin beta chain 5911 1.1.1.381 | Details
149 6U0T 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
150 6U0U 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
151 6S8M 2 B Tubulin beta chain 4896
152 6RZA 3 B, D Tubulin beta chain 9823
153 6RZB 2 B Tubulin beta chain 9823
154 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
155 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
156 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
157 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
158 6I2I 2 B Tubulin beta chain Beta1-tubulin 9606
159 6MLQ 2 B Tubulin beta chain 9823
160 6MLR 2 B Tubulin beta chain 9823
161 6E88 2 B, D, J, K, N, O Tubulin beta-2 chain 6239
162 6E7B 1 B Tubulin beta-3 chain 9606
163 6E7C 1 B Tubulin beta-2B chain 9606
164 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
165 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
166 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
167 6CVJ 2 B, C Tubulin beta chain 9823
168 6CVN 1 A, C Tubulin beta chain 9823
169 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
170 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
171 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
172 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
173 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
174 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
175 6B0C 2 B, D Tubulin beta chain 9823
176 6B0I 3 B Tubulin beta chain 9823
177 6B0L 2 B Tubulin beta chain 9823
178 5OGC 3 B Tubulin beta chain 9823
179 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
180 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
181 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
182 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
183 5OCU 3 B Tubulin beta chain 9823
184 5OAM 3 B Tubulin beta chain 9823
185 5W3F 2 B Tubulin beta chain 4932
186 5W3H 2 B Tubulin beta chain 4932
187 5W3J 2 B Tubulin beta chain 4932
188 5ND2 3 B Tubulin beta-2B chain 9913
189 5ND3 3 B Tubulin beta-2B chain 9913
190 5ND4 3 B Tubulin beta-2B chain 9913
191 5ND7 3 B Tubulin beta-2B chain 9913
192 5N5N 1 A, B, C, D, E, F Tubulin beta chain GMPCPP (GTP-analogue) bound 9606
193 5UCY 2 B Tubulin beta chain 5911 1.1.1.381 | Details
194 5UBQ 2 B, D, F Tubulin beta chain 5911 1.1.1.381 | Details
195 5MM4 3 B Tubulin beta chain 9823
196 5MM7 3 B Tubulin beta chain 9823
197 5MLV 3 C, F, I, L, N, R Tubulin beta chain 4896
198 5MJS 1 A, B, C, J Tubulin beta chain 4896
199 5M5N 2 B Tubulin beta-2B chain 9913
200 5M5O 2 B Tubulin beta-2B chain 9913
201 5M5C 3 B, E Tubulin beta-2B chain 9913
202 5M5I 2 B Tubulin beta-2B chain 9913
203 5M5L 2 B Tubulin beta-2B chain 9913
204 5M5M 2 B Tubulin beta-2B chain 9913
205 5M50 2 B, E Tubulin beta-2B chain 9913
206 5M54 3 B, E Tubulin beta-2B chain 9913
207 5SYF 2 B Tubulin beta chain 9823
208 5SYG 2 B Tubulin beta chain 9823
209 5SYC 2 B Tubulin beta chain 9823
210 5SYE 2 B Tubulin beta chain 9823
211 5KMG 2 B Tubulin beta chain 9823
212 5JCO 1 C, D, I, J, K, L Tubulin beta-3 chain 9606
213 5IJ0 2 B Tubulin beta-3 chain 9606
214 5IJ9 2 B Tubulin beta-3 chain 9606
215 5HNW 2 B Tubulin beta-2B chain 9913
216 5HNX 2 B Tubulin beta-2B chain 9913
217 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
218 5HNZ 2 B Tubulin beta-2B chain 9913
219 3JAW 2 B, D Tubulin beta chain 9823
220 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
221 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
222 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
223 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
224 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
225 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
226 3J8X 3 B Tubulin beta-2B chain 9823
227 3J8Y 3 B Tubulin beta-2B chain 9823
228 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
229 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
230 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
231 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
232 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
233 4UXY 2 B BETA TUBULIN 9913
234 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
235 3J7I 2 B Tubulin beta chain 9823
236 3J6P 3 B Tubulin beta chain 9823
237 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
238 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
239 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
240 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
241 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
242 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
243 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
244 3J2U 3 B, D Tubulin beta-2B chain 9913
245 3J1T 3 C Tubulin beta-2B chain 9913
246 3J1U 3 C Tubulin beta-2B chain 9913
247 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
248 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
249 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
250 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
251 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
252 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
253 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
254 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
255 3EDL 2 B, G Beta tubulin 9913
256 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
257 2P4N 3 B Tubulin beta chain 9913
258 2HXF 2 B Tubulin beta chain 9823
259 2HXH 2 B Tubulin beta chain 9823
260 1TVK 2 B Tubulin beta chain see REMARK 400 9913
261 1JFF 2 B tubulin beta chain 9913
262 1IA0 2 B TUBULIN BETA CHAIN 9823
263 1TUB 2 B TUBULIN 9823