3JAL

Cryo-EM structure of GMPCPP-microtubule co-polymerized with EB3


Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 177 179 40
95 % 239 278 11
90 % 242 281 14
70 % 258 297 15
50 % 258 297 18
40 % 516 594 4
30 % 527 605 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 235 58
95 % 237 275 13
90 % 250 288 9
70 % 259 297 14
50 % 259 297 17
40 % 517 594 4
30 % 528 605 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18199
95 % 3 3 16401
90 % 3 3 16079
70 % 3 3 13725
50 % 3 3 12527
40 % 3 3 11729
30 % 3 3 11765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 2 B Tubulin beta-2B chain 9913
2 5IYZ 2 B, D Tubulin beta-2B chain 9913
3 4I4T 2 B, D Tubulin beta-2B chain 9913
4 5NQU 2 B Tubulin beta-2B chain 9913
5 5LXT 2 B, D Tubulin beta-2B chain 9913
6 5EYP 2 B Tubulin beta chain 9940
7 6QTN 2 B, D Tubulin beta-2B chain 9913
8 6S8L 2 B Tubulin beta-3 chain 9606
9 4IHJ 2 B, D Tubulin beta-2B chain 9913
10 4TV9 2 B, D Tubulin beta-2B chain 9913
11 5M7E 2 B, D Tubulin beta-2B chain 9913
12 3RYC 2 B, D Tubulin beta chain 9940
13 5EZY 2 B, D Tubulin beta-2B chain 9913
14 4LNU 2 B Tubulin beta chain 9940
15 5EIB 2 D Tubulin beta-2B chain 9913
16 6FKL 2 B, D Tubulin beta-2B chain 9913
17 6FJM 2 B, D Tubulin beta-2B chain 9913
18 5M8G 2 B, D Tubulin beta-2B chain 9913
19 5NM5 2 B Tubulin beta-2B chain 9913
20 5NFZ 2 B, D Tubulin beta-2B chain 9913
21 4TUY 2 B, D Tubulin beta-2B chain 9913
22 4DRX 2 B, D Tubulin beta chain UNP residues 1-431 9940
23 6FKJ 2 B, D Tubulin beta-2B chain 9913
24 5LA6 2 B, D Tubulin beta-2B chain 9913
25 6F7C 2 B, D Tubulin beta-2B chain 9913
26 4I55 2 B, D Tubulin beta-2B chain 9913
27 4TV8 2 B, D Tubulin beta-2B chain 9913
28 5NQT 2 B Tubulin beta-2B chain 9913
29 4O4H 2 B, D Tubulin beta-2B chain 9913
30 5NG1 2 B, D Tubulin beta-2B chain 9913
31 5OSK 2 B, D Tubulin beta-2B chain 9913
32 5ITZ 2 B Tubulin beta-2B chain 9913
33 5M8D 2 B, D Tubulin beta-2B chain 9913
34 5M7G 2 B, D Tubulin beta-2B chain 9913
35 6Y6D 2 B, D Tubulin beta-2B chain 9913
36 5YL2 2 B, D Tubulin beta chain 9823
37 4O4L 2 B, D Tubulin beta-2B chain 9913
38 5LXS 2 B, D Tubulin beta-2B chain 9913
39 5JQG 2 B, D Tubulin beta chain 9823
40 5JH7 2 B, D Tubulin beta-2B chain 9913
41 5J2T 2 B, D Tubulin beta-2B chain 9913
42 5XKG 2 B, D Tubulin beta chain 9823
43 5JCB 2 B, D Tubulin beta chain 9823
44 4O2B 2 B, D Tubulin beta-2B chain 9913
45 4O4J 2 B, D Tubulin beta-2B chain 9913
46 5MF4 2 B, D Tubulin beta-2B chain 9913
47 3RYI 2 B, D Tubulin beta chain 9940
48 5CB4 2 B, D Tubulin beta 41807
49 5JVD 2 B, D Tubulin beta-2B chain 9913
50 5XKH 2 B, D Tubulin beta chain 9823
51 6FII 2 B, D Tubulin beta-2B chain 9913
52 6O5M 2 B, D Tubulin beta-2B chain 9823
53 5XP3 2 B, D Tubulin beta chain 9823
54 4I50 2 B, D Tubulin beta-2B chain 9913
55 6S9E 2 B, D Tubulin beta-2B chain 9913
56 6TDE 2 B, D Tubulin beta chain 9940
57 6BR1 2 B, D Tubulin beta-2B chain 9823
58 6QQN 2 B, D Tubulin beta-2B chain 9913
59 3RYF 2 B, D Tubulin beta chain 9940
60 4O4I 2 B, D Tubulin beta-2B chain 9913
61 5LOV 2 B, D Tubulin beta-2B chain 9913
62 5LYJ 2 B, D Tubulin beta-2B chain 9913
63 5OV7 2 B, D Tubulin beta-2B chain 9913
64 6NNG 2 B, D Tubulin beta-2B chain 9823
65 5CA1 2 B, D Tubulin beta-2 chain 9031
66 4ZOL 2 B, D Tubulin beta chain 9823
67 5XLZ 2 B, D Tubulin beta-2B chain 9913
68 6HX8 2 B, D Tubulin beta-2B chain 9913
69 6GJ4 2 B, D Tubulin beta-2B chain 9913
70 6GF3 2 B Tubulin beta-2B chain 9913
71 6GF3 3 D Tubulin beta-2B chain 9913
72 4ZI7 2 B, D Tubulin beta chain 9823
73 6FJF 2 B, D Tubulin beta-2B chain 9913
74 5BMV 2 B, D Tubulin beta chain 9823
75 6BRF 2 B, D Tubulin beta-2B chain 9823
76 6EG5 2 B, D Tubulin beta-2B chain 9913
77 6GWC 2 B Tubulin beta chain 9940
78 4O2A 2 B, D Tubulin beta-2B chain 9913
79 4F6R 2 B Tubulin beta chain 9940
80 5KX5 2 B, D Tubulin beta chain 9940
81 4ZHQ 2 B, D Tubulin beta chain 9823
82 5CA0 2 B, D Uncharacterized protein 9823
83 5NJH 2 B, D Tubulin beta-2B chain 9913
84 7JFR 2 B, D Tubulin beta-2B chain 9913
85 5O7A 2 B, D Tubulin beta-2B chain 9913
86 5FNV 2 B, D TUBULIN BETA CHAIN 10116
87 5GON 2 B, D Tubulin beta-2B chain UNP RESIDUES 1-431 9913
88 6BS2 2 B, D Tubulin beta-2B chain 9823
89 6PC4 2 B, D Tubulin beta-2B chain 9823
90 4YJ2 2 B, D Tubulin beta-2B chain 9913
91 6H9B 2 B, D Tubulin beta chain 9940
92 3RYH 2 B, D Tubulin beta chain 9940
93 6GZE 2 B, D Tubulin beta-2B chain 9913
94 4IIJ 2 B, D Tubulin beta-2B chain 9913
95 5XAF 2 B, D Tubulin beta-2B chain 9913
96 5J2U 2 B, D Tubulin beta-2B chain 9913
97 6KNZ 2 B, D Tubulin beta-2B chain 9913
98 5YZ3 2 B, D Tubulin beta-2B chain 9913
99 5H74 2 B, D Tubulin beta-2B chain 9913
100 6N47 2 B, D Tubulin beta-2B chain 9913
101 3UT5 2 B, D Tubulin beta chain 9940
102 6O61 2 B, D Tubulin beta-2B chain 9823
103 5XAG 2 B, D Tubulin beta-2B chain 9913
104 6GVN 2 B Tubulin beta chain 9940
105 5Z4P 2 B, D Tubulin beta-2B chain UNP residues 1-425 9913
106 6BRY 2 B, D Tubulin beta-2B chain 9823
107 6K9V 2 B, D Tubulin beta-2B chain 9913
108 6KPP 2 B, D Tubulin beta chain 9823
109 6I5C 2 B, D Tubulin beta-2B chain 9913
110 5XKE 2 B, D Tubulin beta chain 9823
111 5C8Y 2 B, D Tubulin beta 41807
112 5YL4 2 B, D Tubulin beta chain 41807
113 6JCJ 2 B, D Tubulin beta-2B chain 9913
114 6D88 2 B, D Tubulin beta chain 9823
115 5YLJ 2 B, D Tubulin beta chain 9823
116 5XLT 2 B, D Tubulin beta-2B chain 9913
117 5ZXH 2 B, D Tubulin beta-2B chain 9913
118 5XKF 2 B, D Tubulin beta chain 9823
119 6AGK 2 B, D Tubulin beta-2B chain 9913
120 5H7O 2 B, D Tubulin beta-2B chain 9913
121 5XIW 2 B, D Tubulin beta chain 9823
122 6GX7 2 B, D Tubulin beta chain 9940
123 4HNA 2 B Tubulin beta chain 9940
124 5XHC 2 B, D Tubulin beta chain 41807
125 6MZG 2 B, D, H, J Tubulin beta chain 9823
126 6O5N 2 B, D Tubulin beta-2B chain 9823
127 4X1I 2 B, D Tubulin beta chain 9940
128 5XI5 2 B, D Tubulin beta chain 41807
129 5Z4U 2 B, D Tubulin beta-2B chain 9913
130 5YLS 2 B, D Tubulin beta chain 9823
131 4X1Y 2 B, D Tubulin beta chain 9940
132 5XI7 2 B, D Tubulin beta chain 41807
133 4X20 2 B, D Tubulin beta chain 9940
134 5MIO 2 B Tubulin beta chain 9940
135 4X1K 2 B, D Tubulin beta chain 9940
136 6GWD 2 B, D, F Tubulin beta chain 9940
137 4EB6 2 B, D Tubulin beta chain 9940
138 6MZE 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
139 5LP6 2 B, D Tubulin beta-2B chain 9913
140 3HKE 2 B, D Tubulin beta chain 9940
141 3HKB 2 B, D Tubulin beta chain 9940
142 3HKD 2 B, D Tubulin beta chain 9940
143 3HKC 2 B, D Tubulin beta chain 9940
144 1SA0 2 B, D Tubulin beta chain 9913
145 6BBN 2 B, D Tubulin beta-2B chain 9913
146 3N2G 2 B, D Tubulin beta chain 9940
147 6GVM 2 B Tubulin beta chain 9940
148 3E22 2 B, D Tubulin beta-2B chain 9913
149 1SA1 2 B, D Tubulin beta chain 9913
150 1Z2B 2 B, D Tubulin beta chain 9913
151 3DU7 2 B, D Tubulin beta-2B chain 9913
152 3N2K 2 B, D Tubulin beta chain 9940
153 4YJ3 2 B, D Tubulin beta-2B chain 9913
154 4F61 2 B, D, F, H Tubulin beta chain 9940
155 6MZF 2 B, D, I, K, P, R, W, Y Tubulin beta chain 9823
156 1FFX 2 B, D PROTEIN (TUBULIN) 9913
157 6WVL 2 B, D Tubulin beta chain 9913
158 6WVM 2 B, D Tubulin beta chain 9913
159 6WVR 2 B, D Tubulin beta chain 9913
160 6WSL 2 B, F Tubulin beta-3 chain 9606
161 6VPO 2 B Tubulin beta chain 9823
162 6VPP 2 B Tubulin beta chain 9823
163 6VE7 5 4, 8, 9, I, J, K, N, O, Q, R, T, U, V, a, b, i, j, p, q, r, t, u, v, w Tubulin beta 3055
164 6TIW 2 B Tubulin beta chain 9823
165 6TA3 1 B Tubulin beta chain 9823
166 6TA4 1 B Tubulin beta chain 9823
167 6U42 1 0A, 0C, 0E, 0G, 0I, 0K, 0M, 0O, 0Q, 0S, 0U, 0W, 0Y, 1, 1A, 1C, 1E, 1G, 1K, 1M, 1O, 1Q, 1S, 1U, 1W, 2A, 2C, 2E, 2G, 2I, 2K, 2M, 2Q, 2S, 2U, 2W, 2Y, 3, 3A, 3C, 3G, 3I, 3K, 3M, 3O, 3Q, 3S, 5, 7, 9, A1, A3, A5, A7, A9, B1, B3, B5, B8, C0, C2, C4, C6, C8, D0, D2, D4, D6, D8, E0, E2, E4, E6, E8, F0, F2, F6, F8, G0, G2, G4, G6, G8, H2, H4, H6, H8, I0, I2, I4, I8, J0, J2, J4, J6, J8, K0, K4, K6, K8, L0, L2, L4, L6, M0, M2, M4, M6, M8, N0, N2, N6, N8, O0, O2, O4, O6, O8, P4, P6, P8, Q0, Q2, Q4, Q6, Q8, R0, R2, R4, R6, R8, S0, S2, S4, S6, S8, T0, T2, T4, T6, T8, U2, U4, U6, U8, V0, V2, V4, V6, V8, W0, W2, W4, W6, W8, X0, X2, X4, X6, X8, Y0, Y2, Y4, Y6, Y8, Z0, Z2, Z4, Z6, Z8 Tubulin beta 3055
168 6U0H 2 B Tubulin beta chain 5911 1.1.1.381 | Details
169 6U0T 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
170 6U0U 2 B, I, J, K, L, M Tubulin beta chain 5911 1.1.1.381 | Details
171 6SES 2 B, D Tubulin beta-2B chain 9913
172 6KIO 1 b Tubulin beta chain 9823
173 6KIQ 2 b Tubulin beta chain 9823
174 6RZA 3 B, D Tubulin beta chain 9823
175 6RZB 2 B Tubulin beta chain 9823
176 6OJQ 1 B Tubulin beta-2B chain 9913
177 6REV 2 B, b Tubulin beta-2B chain 9913
178 6RF2 2 B, b Tubulin beta-2B chain 9913
179 6RF8 2 B, b Tubulin beta-2B chain 9913
180 6RFD 2 B, b Tubulin beta-2B chain 9913
181 6QVJ 3 S, U Tubulin beta chain GDP Taxol 9606
182 6QVE 3 G, H Beta1-tubulin GDP Taxol 9606
183 6QUS 3 S, U Tubulin beta chain GDP Taxol 9606
184 6QUY 3 G, H Tubulin beta chain GDP Taxol 9606
185 6O2Q 2 B, D, F, G, H, I Tubulin beta chain 9823
186 6O2R 2 B, D, F, G, H, I Tubulin beta chain 9823
187 6O2S 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
188 6O2T 2 1H, 1O, 1P, 1Q, 1R, 1S, 1T, 1U, 1V, 1W, 1X, 1Y, 1Z, 2H, 2O, 2P, 2Q, 2R, 2S, 2T, 2U, 2V, 2W, 2X, 2Y, 2Z, 3H, 3O, 3P, 3Q, 3R, 3S, 3T, 3U, 3V, 3W, 3X, 3Y, 3Z, 4H, 4O, 4P, 4Q, 4R, 4S, 4T, 4U, 4V, 4W, 4X, 4Y, 4Z Tubulin beta chain 9823
189 6I2I 2 B Tubulin beta chain Beta1-tubulin 9606
190 6MLQ 2 B Tubulin beta chain 9823
191 6MLR 2 B Tubulin beta chain 9823
192 6E7B 1 B Tubulin beta-3 chain 9606
193 6E7C 1 B Tubulin beta-2B chain 9606
194 6DPU 2 B, D, F, G, H, I Tubulin beta chain 9823
195 6DPV 2 B, D, F, G, H, I Tubulin beta chain 9823
196 6DPW 2 B, D, F, G, H, I Tubulin beta chain 9823
197 6CVJ 2 B, C Tubulin beta chain 9823
198 6CVN 1 A, C Tubulin beta chain 9823
199 6BJC 2 B, D, F, G, H, I Tubulin beta chain 9823
200 6EVX 1 B, D, F, G, H, I Tubulin beta chain 9823
201 6EVY 2 B, D, F, G, H, I Tubulin beta chain 9823
202 6EVZ 1 B, D, F, G, H, I Tubulin beta chain 9823
203 6EW0 2 B, D, F, G, H, I Tubulin beta chain 9823
204 6EVW 2 B, D, F, G, H, I Tubulin beta chain 9823
205 6B0C 2 B, D Tubulin beta chain 9823
206 6B0I 3 B Tubulin beta chain 9823
207 6B0L 2 B Tubulin beta chain 9823
208 5OGC 3 B Tubulin beta chain 9823
209 5XXT 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
210 5XXV 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
211 5XXW 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
212 5XXX 2 B, D, F, H, J, L, N, P, R Tubulin beta chain UNP residues 2-427 9823
213 5OCU 3 B Tubulin beta chain 9823
214 5OAM 3 B Tubulin beta chain 9823
215 5ND2 3 B Tubulin beta-2B chain 9913
216 5ND3 3 B Tubulin beta-2B chain 9913
217 5ND4 3 B Tubulin beta-2B chain 9913
218 5ND7 3 B Tubulin beta-2B chain 9913
219 5N5N 1 A, B, C, D, E, F Tubulin beta chain GMPCPP (GTP-analogue) bound 9606
220 5UCY 2 B Tubulin beta chain 5911 1.1.1.381 | Details
221 5UBQ 2 B, D, F Tubulin beta chain 5911 1.1.1.381 | Details
222 5MM4 3 B Tubulin beta chain 9823
223 5MM7 3 B Tubulin beta chain 9823
224 5M5N 2 B Tubulin beta-2B chain 9913
225 5M5O 2 B Tubulin beta-2B chain 9913
226 5M5C 3 B, E Tubulin beta-2B chain 9913
227 5M5I 2 B Tubulin beta-2B chain 9913
228 5M5L 2 B Tubulin beta-2B chain 9913
229 5M5M 2 B Tubulin beta-2B chain 9913
230 5M50 2 B, E Tubulin beta-2B chain 9913
231 5M54 3 B, E Tubulin beta-2B chain 9913
232 5SYF 2 B Tubulin beta chain 9823
233 5SYG 2 B Tubulin beta chain 9823
234 5SYC 2 B Tubulin beta chain 9823
235 5SYE 2 B Tubulin beta chain 9823
236 5KMG 2 B Tubulin beta chain 9823
237 5JCO 1 C, D, I, J, K, L Tubulin beta-3 chain 9606
238 5IJ0 2 B Tubulin beta-3 chain 9606
239 5IJ9 2 B Tubulin beta-3 chain 9606
240 5HNW 2 B Tubulin beta-2B chain 9913
241 5HNX 2 B Tubulin beta-2B chain 9913
242 5HNY 2 B Tubulin beta-2B chain UNP residues 2-427 9913
243 5HNZ 2 B Tubulin beta-2B chain 9913
244 3JAW 2 B, D Tubulin beta chain 9823
245 3JAT 2 B, D, F, G, H, I Tubulin beta chain 9823
246 3JAR 2 B, D, F, G, H, I Tubulin beta chain 9823
247 3JAS 2 B, D, F, G, H, I Tubulin beta chain 9823
248 3JAO 2 B Tubulin beta chain SEE REMARK 999 5911
249 3JAK 2 B, D, F, G, H, I Tubulin beta chain 9823
250 3JAL 2 B, D, F, G, H, I Tubulin beta chain 9823
251 3J8X 3 B Tubulin beta-2B chain 9823
252 3J8Y 3 B Tubulin beta-2B chain 9823
253 4UXO 2 B TUBULIN BETA-2B CHAIN 9913
254 4UXP 2 B TUBULIN BETA-2B CHAIN 9913
255 4UXR 2 B TUBULIN BETA-2B CHAIN 9913
256 4UXS 2 B TUBULIN BETA-2B CHAIN 9913
257 4UXT 2 B TUBULIN BETA-2B CHAIN 9913
258 4UXY 2 B BETA TUBULIN 9913
259 4UY0 2 B TUBULIN BETA-2B CHAIN RESIDUES 2-427 9913
260 3J7I 2 B Tubulin beta chain 9823
261 3J6P 3 B Tubulin beta chain 9823
262 3J6H 2 B Tubulin beta chain UNP residues 2-427 9823
263 3J6F 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
264 3J6G 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
265 3J6E 2 B, D, F, H, J, L, N, P, R Tubulin beta chain 9823
266 4CK5 2 B TUBULIN BETA-2B CHAIN 9913
267 4CK6 2 B TUBULIN BETA-2B CHAIN 9913
268 4CK7 2 B TUBULIN BETA-2B CHAIN 9913
269 3J2U 3 B, D Tubulin beta-2B chain 9913
270 3J1T 3 C Tubulin beta-2B chain 9913
271 3J1U 3 C Tubulin beta-2B chain 9913
272 4ATX 1 A TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
273 4ATU 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
274 4AQV 2 B TUBULIN BETA-2B CHAIN 9913
275 4AQW 2 B TUBULIN BETA-2B CHAIN 9913
276 4ABO 1 A, C, E, G TUBULIN BETA CHAIN 9823 3.6.5.6 | Details
277 2XRP 1 A, C, E, G TUBULIN BETA-2B CHAIN 9913 3.6.5.6 | Details
278 3IZ0 2 B beta tubulin, Chain B from PDB 1JFF 9913
279 2WBE 2 B TUBULIN BETA-2B CHAIN 9913
280 3EDL 2 B, G Beta tubulin 9913
281 3DCO 3 B Bovine Beta Tubulin Beta Tubulin Subunit 9913
282 2P4N 3 B Tubulin beta chain 9913
283 2HXF 2 B Tubulin beta chain 9823
284 2HXH 2 B Tubulin beta chain 9823
285 1TVK 2 B Tubulin beta chain see REMARK 400 9913
286 1JFF 2 B tubulin beta chain 9913
287 1IA0 2 B TUBULIN BETA CHAIN 9823
288 1TUB 2 B TUBULIN 9823