Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 163 165 42
95 % 218 257 13
90 % 219 258 15
70 % 234 273 13
50 % 234 273 18
40 % 468 546 4
30 % 479 557 8
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 104 57
95 % 215 253 14
90 % 227 265 8
70 % 235 273 12
50 % 235 273 17
40 % 469 546 4
30 % 480 557 8
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 13820
95 % 3 3 13740
90 % 3 3 15184
70 % 3 3 14072
50 % 3 3 12808
40 % 3 3 12094
30 % 3 3 10953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3JAR 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606
2 3JAK 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606
3 3JAL 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606