Sequence Similarity Clusters for the Entities in PDB 3JAL

Entity #1 | Chains: A,C,E,J,K,L
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 156 43
95 % 209 248 12
90 % 210 249 15
70 % 224 263 21
50 % 224 263 41
40 % 448 526 8
30 % 456 534 11
Entity #2 | Chains: B,D,F,G,H,I
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 57 85 76
95 % 207 245 13
90 % 217 255 13
70 % 225 263 20
50 % 225 263 39
40 % 449 526 8
30 % 457 534 11
Entity #3 | Chains: M,N
Microtubule-associated protein RP/EB family member 3 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15752
95 % 3 3 13432
90 % 3 3 14622
70 % 3 3 12551
50 % 3 3 12674
40 % 3 3 11689
30 % 3 3 10725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3JAR 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606
2 3JAK 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606
3 3JAL 3 M, N Microtubule-associated protein RP/EB family member 3 UNP residues 1-200 9606