Sequence Similarity Clusters for the Entities in PDB 4D98

Entity #1 | Chains: A,B
Purine nucleoside phosphorylase deoD-type protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 14 2619
95 % 2 14 3227 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 2 14 3308
70 % 7 21 1882
50 % 12 73 191
40 % 12 84 187
30 % 35 141 143

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures