Sequence Similarity Clusters for the Entities in PDB 4DAO

Entity #1 | Chains: A,B
Purine nucleoside phosphorylase deoD-type protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 2333
95 % 6 14 2940 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 6 14 3027
70 % 12 21 1877
50 % 32 73 188
40 % 33 84 188
30 % 84 141 142

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures