Sequence Similarity Clusters for the Entities in PDB 4DAO

Entity #1 | Chains: A,B
Purine nucleoside phosphorylase deoD-type protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 2538
95 % 6 14 3178 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.6
PDBFlex
90 % 6 14 3252
70 % 12 21 1868
50 % 32 73 190
40 % 33 84 188
30 % 84 141 144

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4D8Y 1 A, B, C, D, E, F Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
2 4D98 1 A, B Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
3 4DA6 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
4 4D9H 1 A, B Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
5 4DAB 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
6 4DAO 1 A, B Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
7 4DA7 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
8 4DAN 1 A, B Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
9 4DAE 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
10 4D8V 1 A, B Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
11 4D8X 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
12 4DA8 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
13 4DA0 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details
14 4DAR 1 A Purine nucleoside phosphorylase deoD-type 1423 2.4.2.1 | Details