4FA8

Multi-pronged modulation of cytokine signaling


Sequence Similarity Clusters for the Entities in PDB 4FA8

Entity #1 | Chains: A,B,D
Secreted protein BARF1 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13646
95 % 2 5 2808 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 2 5 2881
70 % 2 5 2924
50 % 2 5 2921
40 % 2 5 2915
30 % 2 5 2837
Entity #2 | Chains: E,F,G
Macrophage colony-stimulating factor 1 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 1580
95 % 1 7 2098 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 7 2175
70 % 1 2 16952
50 % 1 2 15274
40 % 1 2 14169
30 % 1 2 12311

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures

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