Sequence Similarity Clusters for the Entities in PDB 4G0R

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 735 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 54643
95 % 1 2 31389 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 30125
70 % 1 2 27121
50 % 1 2 23790
40 % 1 2 21677
30 % 1 2 19390
Entity #2 | Chains: C
DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures