Sequence Similarity Clusters for the Entities in PDB 4G0R

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 735 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42550
95 % 1 2 44126 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 2 41948
70 % 1 2 37051
50 % 1 2 27736
40 % 1 2 25279
30 % 1 2 22445
Entity #2 | Chains: C
DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3') dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures