Sequence Similarity Clusters for the Entities in PDB 4RET

Entity #1 | Chains: A,C
Sodium/potassium-transporting ATPase subunit alpha-1 protein, length: 1021 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5139
95 % 6 10 4155 Flexibility: Medium
Max RMSD: 12.6, Avg RMSD: 6.5
PDBFlex
90 % 6 10 4317
70 % 22 32 1712
50 % 27 44 1327
40 % 27 44 1383
30 % 27 44 1403
Entity #2 | Chains: B,D
Sodium/potassium-transporting ATPase subunit beta-1 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 7047
95 % 6 8 5299 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.7
PDBFlex
90 % 6 9 4914
70 % 6 9 4830
50 % 22 31 1893
40 % 22 31 1931
30 % 27 43 1464
Entity #3 | Chains: E,G
Na+/K+ ATPase gamma subunit transcript variant a protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 8555
95 % 5 6 7388 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 6 7423
70 % 5 6 6733
50 % 5 7 6168
40 % 5 7 5820
30 % 5 7 5786

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2ZXE 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
2 5AW9 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
3 5AVQ 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
4 5AVU 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
5 5AVW 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
6 3A3Y 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
7 5AW8 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
8 5AVR 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
9 3WGU 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 UNP RESIDUES 5-1020 9823 7.2.2.13 | Details
10 3WGV 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 UNP RESIDUES 5-1020 9823 7.2.2.13 | Details
11 5AW6 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
12 5AVT 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
13 5AW4 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
14 4HYT 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 9823 7.2.2.13 | Details
15 5AVV 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
16 5AVS 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
17 5AW7 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
18 4RES 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 9823 7.2.2.13 | Details
19 3KDP 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 ALPHA chain (UNP RESIDUES 24-1021) 9823 7.2.2.13 | Details
20 5AW5 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
21 5AW2 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
22 4RET 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 9823 7.2.2.13 | Details
23 5AW0 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
24 5AVZ 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
25 3B8E 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 residues 19-1016 9823 7.2.2.13 | Details
26 5AW1 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
27 5AW3 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
28 5AVX 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
29 5AVY 1 A Na, K-ATPase alpha subunit 7797 3.6.3 | Details
30 4HQJ 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 9823 7.2.2.13 | Details
31 3N23 1 A, C Sodium/potassium-transporting ATPase subunit alpha-1 ALPHA chain (UNP RESIDUES 30-1021) 9823 7.2.2.13 | Details
32 4XE5 1 A Sodium/potassium-transporting ATPase subunit alpha-1 BFD374 is an aspartate 374 that is covalently modified with beryllium fluoride 9913 7.2.2.13 | Details