Sequence Similarity Clusters for the Entities in PDB 5FPD

Entity #1 | Chains: A,B
HEAT SHOCK-RELATED 70KDA PROTEIN 2 protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 12404
95 % 4 5 12268 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 4 5 11492
70 % 56 129 289
50 % 56 133 334
40 % 59 136 341
30 % 59 137 356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures