Sequence Similarity Clusters for the Entities in PDB 5ICX

Entity #1 | Chains: A,C
Cetuximab Fab light chain protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 809
95 % 31 37 853 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 33 40 821
70 % 1108 2383 2
50 % 1397 3022 2
40 % 1397 3022 2
30 % 2854 6138 1
Entity #2 | Chains: B,D
Cetuximab Fab heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 838
95 % 33 39 846 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.6
PDBFlex
90 % 33 39 880
70 % 1361 2922 1
50 % 1432 3059 1
40 % 1441 3072 1
30 % 2855 6138 1
Entity #3 | Chains: E,F
Meditope protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures