Sequence Similarity Clusters for the Entities in PDB 5JS2

Entity #1 | Chains: A
Protein argonaute-2 protein, length: 859 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 16 4263
95 % 22 26 2514 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 2.4
PDBFlex
90 % 22 26 2590
70 % 27 32 2006
50 % 27 32 2085
40 % 27 32 2123
30 % 27 32 2146
Entity #2 | Chains: B
modified siRNA rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures