5TAQ

Structure of rabbit RyR1 (Caffeine/ATP/Ca2+ dataset, class 3&4)


Sequence Similarity Clusters for the Entities in PDB 5TAQ

Entity #1 | Chains: A,F,H,J
Peptidyl-prolyl cis-trans isomerase FKBP1B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 38 271
95 % 23 40 332
90 % 23 40 351
70 % 66 96 235
50 % 75 105 231
40 % 90 124 203
30 % 90 124 217
Entity #2 | Chains: B,E,G,I
Ryanodine receptor 1 protein, length: 4416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 20 579
95 % 8 20 779
90 % 10 27 557
70 % 8 20 841
50 % 8 21 822
40 % 8 21 850
30 % 8 21 901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures