5TAQ

Structure of rabbit RyR1 (Caffeine/ATP/Ca2+ dataset, class 3&4)


Sequence Similarity Clusters for the Entities in PDB 5TAQ

Entity #1 | Chains: A,F,H,J
Peptidyl-prolyl cis-trans isomerase FKBP1B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 38 242
95 % 23 40 315
90 % 23 40 327
70 % 65 95 221
50 % 79 109 203
40 % 79 109 215
30 % 79 109 228
Entity #2 | Chains: B,E,G,I
Ryanodine receptor 1 protein, length: 4416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 20 541
95 % 8 20 732
90 % 10 27 524
70 % 8 20 804
50 % 8 21 781
40 % 8 21 817
30 % 8 21 859

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures