5TAS

Structure of rabbit RyR1 (Caffeine/ATP/EGTA dataset, class 1)


Sequence Similarity Clusters for the Entities in PDB 5TAS

Entity #1 | Chains: A,F,H,J
Peptidyl-prolyl cis-trans isomerase FKBP1B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 38 240
95 % 24 40 311
90 % 24 40 324
70 % 66 95 214
50 % 80 109 201
40 % 80 109 214
30 % 80 109 228
Entity #2 | Chains: B,E,G,I
Ryanodine receptor 1 protein, length: 4416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 20 541
95 % 9 20 727
90 % 11 27 509
70 % 9 20 789
50 % 9 21 775
40 % 9 21 810
30 % 9 21 849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures