5TAS

Structure of rabbit RyR1 (Caffeine/ATP/EGTA dataset, class 1)


Sequence Similarity Clusters for the Entities in PDB 5TAS

Entity #1 | Chains: A,F,H,J
Peptidyl-prolyl cis-trans isomerase FKBP1B protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 38 242
95 % 24 40 314
90 % 24 40 326
70 % 66 95 223
50 % 80 109 201
40 % 80 109 213
30 % 80 109 228
Entity #2 | Chains: B,E,G,I
Ryanodine receptor 1 protein, length: 4416 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 20 549
95 % 9 20 742
90 % 11 27 524
70 % 9 20 812
50 % 9 21 780
40 % 9 21 818
30 % 9 21 864

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures