Sequence Similarity Clusters for the Entities in PDB 6F6I

Entity #1 | Chains: A
Envelope glycoprotein,GP,GP1 protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 14656
95 % 9 14 4116 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.1
PDBFlex
90 % 10 18 2730
70 % 10 19 2498
50 % 10 19 2432
40 % 10 19 2490
30 % 10 19 2471
Entity #2 | Chains: B
Envelope glycoprotein protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 8905
95 % 10 14 4452 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 10 14 4548
70 % 10 17 3057
50 % 10 17 3046
40 % 10 17 3047
30 % 10 17 3008

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures