Sequence Similarity Clusters for the Entities in PDB 6HGD

Entity #1 | Chains: A
Alpha-1-antichymotrypsin protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69043
95 % 9 27 2629 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.6
PDBFlex
90 % 9 27 2695
70 % 9 27 2729
50 % 16 72 791
40 % 23 106 472
30 % 31 165 234
Entity #2 | Chains: B
Alpha-1-antichymotrypsin protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69044
95 % 9 17 4434 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 0.9
PDBFlex
90 % 9 17 4692
70 % 9 21 3723
50 % 9 21 3669
40 % 9 21 3649
30 % 9 21 3567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures