6MTC

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)


Sequence Similarity Clusters for the Entities in PDB 6MTC

Entity #1 | Chains: 4
Z-site tRNA rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: F
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 27 2241
95 % 26 71 919
90 % 26 71 948
70 % 26 71 977
50 % 92 184 280
40 % 92 184 296
30 % 92 183 324
Entity #11 | Chains: G
60S ribosomal protein L7a protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 18 3844
95 % 4 18 4467
90 % 4 18 4514
70 % 4 18 4493
50 % 4 18 4411
40 % 4 18 4325
30 % 4 18 4226
Entity #12 | Chains: H
60S ribosomal protein L9 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1651
95 % 26 71 929
90 % 26 71 956
70 % 26 71 986
50 % 92 192 266
40 % 93 193 269
30 % 161 265 204
Entity #13 | Chains: I
60S ribosomal protein L10 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 33 1693
95 % 26 71 914
90 % 26 71 940
70 % 27 83 806
50 % 86 175 306
40 % 86 175 317
30 % 86 175 337
Entity #14 | Chains: J
60S ribosomal protein L11 protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 64 766
95 % 27 72 886
90 % 27 72 921
70 % 93 185 256
50 % 95 189 264
40 % 95 189 282
30 % 95 189 300
Entity #15 | Chains: L
60S ribosomal protein L13 protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 27 2220
95 % 26 70 942
90 % 26 70 972
70 % 26 70 999
50 % 90 175 311
40 % 91 182 300
30 % 91 182 325
Entity #16 | Chains: M
60S ribosomal protein L14 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 14 5203
95 % 14 25 3103
90 % 14 28 2808
70 % 14 28 2839
50 % 14 28 2827
40 % 14 29 2756
30 % 14 29 2707
Entity #17 | Chains: N
60S Ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 676
95 % 26 71 922
90 % 26 71 951
70 % 92 182 261
50 % 94 196 251
40 % 94 196 262
30 % 94 196 278
Entity #18 | Chains: O
60S ribosomal protein L13a protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 22 2965
95 % 26 71 924
90 % 26 71 953
70 % 26 71 982
50 % 92 184 276
40 % 92 185 290
30 % 92 185 313
Entity #19 | Chains: P
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 9 9281
95 % 14 33 2185
90 % 14 33 2231
70 % 14 33 2299
50 % 92 194 253
40 % 92 194 266
30 % 92 194 279
Entity #2 | Chains: 5
28S rRNA rna, length: 3597 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: Q
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 23 2815
95 % 22 67 987
90 % 26 71 954
70 % 26 72 960
50 % 91 185 287
40 % 91 190 287
30 % 91 190 305
Entity #21 | Chains: R
60S ribosomal protein L19 protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 68 719
95 % 27 72 898
90 % 27 72 915
70 % 27 73 937
50 % 91 184 283
40 % 91 185 295
30 % 91 185 321
Entity #22 | Chains: S
60S ribosomal protein L18a protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 33 1712
95 % 22 61 1091
90 % 22 61 1129
70 % 26 65 1096
50 % 90 175 315
40 % 91 176 318
30 % 91 177 335
Entity #23 | Chains: T
60S ribosomal protein L21 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 70 698
95 % 26 71 927
90 % 26 71 955
70 % 26 72 967
50 % 91 174 316
40 % 91 180 312
30 % 93 187 307
Entity #24 | Chains: U
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 12630
95 % 14 29 2575
90 % 14 29 2658
70 % 14 29 2705
50 % 14 33 2393
40 % 34 59 1054
30 % 34 60 1079
Entity #25 | Chains: V
60S ribosomal protein L23 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 666
95 % 26 71 907
90 % 26 71 935
70 % 93 196 226
50 % 93 197 244
40 % 93 197 257
30 % 93 197 269
Entity #26 | Chains: W
60S ribosomal protein L24 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 45 1159
95 % 14 45 1577
90 % 14 45 1594
70 % 14 45 1642
50 % 14 46 1646
40 % 59 114 484
30 % 59 114 505
Entity #27 | Chains: X
60S ribosomal protein L23a protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 28 2161
95 % 14 28 2757
90 % 14 28 2821
70 % 14 29 2704
50 % 34 56 1092
40 % 34 56 1115
30 % 34 56 1164
Entity #28 | Chains: Y
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 72 657
95 % 27 72 893
90 % 27 72 926
70 % 25 68 1046
50 % 93 192 260
40 % 93 192 275
30 % 93 192 289
Entity #29 | Chains: Z
60S ribosomal protein L27 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 70 679
95 % 26 70 933
90 % 26 70 958
70 % 26 70 988
50 % 90 170 323
40 % 91 183 298
30 % 92 185 318
Entity #3 | Chains: 7
5S rRNA rna, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #30 | Chains: a
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1660
95 % 26 71 915
90 % 26 71 941
70 % 26 73 940
50 % 92 187 272
40 % 93 188 284
30 % 93 190 296
Entity #31 | Chains: b
60S ribosomal protein L29 protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 24 2700
95 % 8 24 3270
90 % 8 24 3343
70 % 8 24 3354
50 % 8 24 3329
40 % 8 24 3318
30 % 8 24 3270
Entity #32 | Chains: c
60S ribosomal protein L30 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 13021
95 % 14 28 2660
90 % 14 28 2717
70 % 27 77 892
50 % 95 193 252
40 % 95 193 267
30 % 95 193 280
Entity #33 | Chains: d
60S ribosomal protein L31 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 28 2174
95 % 14 28 2650
90 % 14 28 2728
70 % 14 28 2770
50 % 92 184 277
40 % 92 184 293
30 % 92 184 317
Entity #34 | Chains: e
60S ribosomal protein L32 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 667
95 % 26 71 910
90 % 26 71 938
70 % 26 72 952
50 % 93 188 267
40 % 93 192 271
30 % 93 193 282
Entity #35 | Chains: f
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1673
95 % 26 70 937
90 % 26 70 966
70 % 26 70 996
50 % 90 180 301
40 % 91 182 308
30 % 91 182 331
Entity #36 | Chains: g
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 70 685
95 % 26 70 940
90 % 26 70 959
70 % 26 70 990
50 % 90 169 326
40 % 90 169 337
30 % 90 169 359
Entity #37 | Chains: h
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1676
95 % 27 72 892
90 % 27 72 925
70 % 27 72 965
50 % 92 187 279
40 % 93 198 255
30 % 94 200 263
Entity #38 | Chains: i
60S ribosomal protein L36 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1627
95 % 26 70 944
90 % 26 70 973
70 % 26 70 1000
50 % 26 72 992
40 % 91 177 313
30 % 91 187 311
Entity #39 | Chains: j
60S ribosomal protein L37 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 25 2440
95 % 14 32 2296
90 % 14 32 2383
70 % 14 32 2463
50 % 92 192 259
40 % 92 192 274
30 % 92 192 288
Entity #4 | Chains: 8
5.8S rRNA rna, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #40 | Chains: k
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 67 728
95 % 27 71 928
90 % 27 71 937
70 % 27 74 925
50 % 27 74 970
40 % 27 74 999
30 % 27 74 1043
Entity #41 | Chains: l
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 27 2255
95 % 26 71 917
90 % 26 71 946
70 % 91 176 271
50 % 92 188 270
40 % 92 190 277
30 % 93 191 291
Entity #42 | Chains: m
60S ribosomal protein L40 protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 35 1616
95 % 18 35 2062
90 % 18 36 2046
70 % 63 95 463
50 % 63 95 506
40 % 63 95 539
30 % 63 95 565
Entity #43 | Chains: n
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 78 554
95 % 32 81 720
90 % 32 81 757
70 % 81 162 283
50 % 81 162 333
40 % 81 162 345
30 % 81 162 364
Entity #44 | Chains: o
60S ribosomal protein L36a protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 670
95 % 26 71 918
90 % 26 71 947
70 % 91 173 278
50 % 93 180 295
40 % 93 181 301
30 % 93 181 326
Entity #45 | Chains: p
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 669
95 % 26 71 925
90 % 26 71 943
70 % 26 74 921
50 % 92 183 281
40 % 93 184 294
30 % 115 207 252
Entity #46 | Chains: r
60S ribosomal protein L28 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1625
95 % 26 70 947
90 % 26 70 976
70 % 26 70 1007
50 % 26 70 1043
40 % 26 71 1055
30 % 26 73 1062
Entity #47 | Chains: u
60S ribosomal protein L10a protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 27 2208
95 % 10 27 2823
90 % 10 27 2872
70 % 10 28 2774
50 % 16 61 1192
40 % 16 61 1227
30 % 16 61 1261
Entity #48 | Chains: v
Interferon-related developmental regulator 2 protein, length: 441 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61450
95 % 1 1 45790
90 % 1 1 43521
70 % 1 1 38299
50 % 1 1 33121
40 % 1 1 29985
30 % 1 1 26530
Entity #49 | Chains: 9
18S rRNA rna, length: 1698 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: A
60S ribosomal protein L8 protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 71 668
95 % 26 71 909
90 % 26 71 945
70 % 91 173 276
50 % 92 186 274
40 % 160 257 199
30 % 160 257 210
Entity #50 | Chains: AA
40S ribosomal protein SA protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 9 9237
95 % 17 30 2484
90 % 17 30 2604
70 % 17 30 2645
50 % 34 62 973
40 % 73 133 398
30 % 73 133 412
Entity #51 | Chains: BB
40S ribosomal protein S3a protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 22 2905
95 % 15 27 2796
90 % 15 27 2865
70 % 15 27 2889
50 % 15 30 2638
40 % 15 30 2650
30 % 19 38 2069
Entity #52 | Chains: CC
40S ribosomal protein S2 protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 9 9859
95 % 17 32 2316
90 % 17 32 2357
70 % 17 35 2196
50 % 34 62 965
40 % 34 62 994
30 % 34 62 1040
Entity #53 | Chains: DD
40S ribosomal protein S3 protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 32 1804
95 % 28 73 805
90 % 28 73 833
70 % 28 74 856
50 % 82 168 317
40 % 82 168 328
30 % 82 168 346
Entity #54 | Chains: EE
40S ribosomal protein S4, X isoform protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 54 880
95 % 34 73 809
90 % 36 85 718
70 % 92 180 257
50 % 95 191 247
40 % 95 195 251
30 % 100 204 248
Entity #55 | Chains: FF
40S ribosomal protein S5 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 86 493
95 % 36 86 659
90 % 36 86 686
70 % 43 101 604
50 % 98 201 227
40 % 98 201 237
30 % 98 201 253
Entity #56 | Chains: GG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 84 512
95 % 36 85 685
90 % 36 85 711
70 % 40 91 683
50 % 93 182 288
40 % 93 187 288
30 % 93 187 306
Entity #57 | Chains: HH
40S ribosomal protein S7 protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 84 517
95 % 36 85 678
90 % 36 85 715
70 % 36 86 722
50 % 95 188 265
40 % 95 188 279
30 % 97 191 275
Entity #58 | Chains: II
40S ribosomal protein S8 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 77 565
95 % 36 85 672
90 % 36 85 698
70 % 36 85 727
50 % 95 190 248
40 % 95 194 254
30 % 95 194 267
Entity #59 | Chains: JJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 85 506
95 % 36 85 676
90 % 36 85 702
70 % 95 185 246
50 % 98 200 229
40 % 102 208 228
30 % 102 208 241
Entity #6 | Chains: B
60S ribosomal protein L3 protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1641
95 % 26 71 920
90 % 26 71 949
70 % 26 72 964
50 % 94 197 243
40 % 94 197 256
30 % 94 199 266
Entity #60 | Chains: KK
40S ribosomal protein S10 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 29 1991
95 % 17 29 2561
90 % 17 29 2613
70 % 17 29 2665
50 % 17 30 2657
40 % 17 30 2671
30 % 17 30 2659
Entity #61 | Chains: LL
40S ribosomal protein S11 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 86 498
95 % 36 86 669
90 % 36 86 695
70 % 36 87 715
50 % 96 197 236
40 % 96 197 246
30 % 96 197 259
Entity #62 | Chains: MM
40S ribosomal protein S12 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 26 64 702
95 % 30 77 764
90 % 30 77 796
70 % 35 82 770
50 % 35 83 796
40 % 35 83 822
30 % 35 83 862
Entity #63 | Chains: NN
40S ribosomal protein S13 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 85 507
95 % 36 85 677
90 % 36 85 703
70 % 96 190 235
50 % 98 197 235
40 % 102 205 232
30 % 103 206 244
Entity #64 | Chains: OO
40S ribosomal protein S14 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 73 599
95 % 35 73 800
90 % 41 81 752
70 % 98 198 200
50 % 98 199 230
40 % 98 199 240
30 % 98 199 254
Entity #65 | Chains: PP
40S ribosomal protein S15 protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 42 1268
95 % 36 84 693
90 % 36 84 723
70 % 36 86 718
50 % 91 179 293
40 % 95 186 286
30 % 95 187 302
Entity #66 | Chains: QQ
40S ribosomal protein S16 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 76 575
95 % 28 76 769
90 % 28 76 801
70 % 28 79 792
50 % 90 190 245
40 % 94 198 242
30 % 95 199 255
Entity #67 | Chains: RR
40S ribosomal protein S17 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 55 820
95 % 36 85 675
90 % 36 85 700
70 % 36 86 721
50 % 91 176 296
40 % 91 176 305
30 % 91 176 329
Entity #68 | Chains: SS
40S ribosomal protein S18 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 86 494
95 % 36 86 662
90 % 36 86 689
70 % 95 183 249
50 % 98 192 242
40 % 103 202 235
30 % 103 202 250
Entity #69 | Chains: TT
40S ribosomal protein S19 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 24 2757
95 % 36 85 684
90 % 36 85 710
70 % 36 85 739
50 % 36 87 758
40 % 36 87 783
30 % 38 90 769
Entity #7 | Chains: C
60S ribosomal protein L4 protein, length: 362 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 20 3252
95 % 18 39 1816
90 % 18 39 1826
70 % 18 39 1878
50 % 84 156 343
40 % 93 197 258
30 % 93 197 272
Entity #70 | Chains: UU
40S ribosomal protein S20 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 25 2414
95 % 15 27 2826
90 % 15 27 2890
70 % 15 27 2925
50 % 15 30 2621
40 % 19 38 2026
30 % 403 591 33
Entity #71 | Chains: VV
40S ribosomal protein S21 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 65 682
95 % 36 84 696
90 % 36 84 726
70 % 36 85 729
50 % 88 171 310
40 % 88 171 321
30 % 88 171 341
Entity #72 | Chains: WW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 86 496
95 % 36 86 666
90 % 36 86 692
70 % 99 203 191
50 % 99 203 222
40 % 104 212 225
30 % 492 778 21
Entity #73 | Chains: XX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 84 514
95 % 36 88 646
90 % 36 89 668
70 % 98 204 184
50 % 103 214 209
40 % 103 214 222
30 % 103 214 234
Entity #74 | Chains: YY
40S ribosomal protein S24 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 77 563
95 % 36 85 680
90 % 36 85 706
70 % 36 86 724
50 % 93 192 255
40 % 93 192 268
30 % 93 192 281
Entity #75 | Chains: ZZ
40S ribosomal protein S25 protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 23 2794
95 % 14 23 3464
90 % 14 23 3530
70 % 14 23 3532
50 % 27 46 1274
40 % 27 46 1305
30 % 27 46 1358
Entity #76 | Chains: aa
40S ribosomal protein S26 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 26 2352
95 % 15 30 2432
90 % 15 30 2537
70 % 15 30 2603
50 % 57 85 545
40 % 57 85 582
30 % 57 85 598
Entity #77 | Chains: bb
40S ribosomal protein S27 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 85 508
95 % 36 85 681
90 % 36 85 707
70 % 89 175 264
50 % 92 187 256
40 % 92 187 273
30 % 92 187 284
Entity #78 | Chains: cc
40S ribosomal protein S28 protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 4823
95 % 8 15 5728
90 % 8 18 4605
70 % 96 191 233
50 % 102 202 223
40 % 103 203 234
30 % 103 203 249
Entity #79 | Chains: dd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 79 549
95 % 36 83 710
90 % 36 83 737
70 % 89 168 277
50 % 90 177 297
40 % 90 177 306
30 % 90 177 330
Entity #8 | Chains: D
60S ribosomal protein L5 protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 34 1654
95 % 26 71 905
90 % 26 71 933
70 % 26 71 973
50 % 92 182 286
40 % 93 184 292
30 % 93 184 315
Entity #80 | Chains: ee
40S ribosomal protein S30 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 4893
95 % 8 15 5852
90 % 22 54 1311
70 % 22 56 1295
50 % 94 171 355
40 % 94 171 367
30 % 94 171 380
Entity #81 | Chains: ff
40S ribosomal protein S27a protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 28 2110
95 % 17 32 2324
90 % 17 32 2368
70 % 59 78 616
50 % 59 82 619
40 % 59 82 656
30 % 59 82 676
Entity #82 | Chains: gg
Receptor of activated protein C kinase 1 protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 85 484
95 % 37 85 651
90 % 37 85 682
70 % 38 87 696
50 % 94 176 275
40 % 96 182 264
30 % 96 183 276
Entity #9 | Chains: E
60S ribosomal protein L6 protein, length: 291 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 24 2637
95 % 8 24 3436
90 % 8 24 3510
70 % 14 40 1817
50 % 14 40 1867
40 % 14 40 1903
30 % 14 40 1930

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures