6OLF

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs


Sequence Similarity Clusters for the Entities in PDB 6OLF

Entity #1 | Chains: S2
18S ribosomal RNA rna, length: 1714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: SL
40S ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 78 516
95 % 16 78 698
90 % 16 78 731
70 % 16 79 750
50 % 66 184 234
40 % 66 184 246
30 % 66 184 265
Entity #11 | Chains: SP
40S ribosomal protein S15 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7129
95 % 5 24 3139
90 % 5 24 3145
70 % 5 24 3233
50 % 61 166 304
40 % 62 171 307
30 % 62 171 329
Entity #12 | Chains: SQ
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 70 588
95 % 10 70 794
90 % 10 70 833
70 % 10 73 833
50 % 62 179 250
40 % 62 183 252
30 % 63 184 266
Entity #13 | Chains: SR
40S ribosomal protein S17 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 51 867
95 % 16 77 703
90 % 16 77 739
70 % 16 78 765
50 % 61 163 305
40 % 61 163 321
30 % 61 163 340
Entity #14 | Chains: SS
40S ribosomal protein S18 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 78 510
95 % 16 78 691
90 % 16 78 723
70 % 66 170 259
50 % 68 179 253
40 % 68 184 248
30 % 69 185 264
Entity #15 | Chains: ST
40S ribosomal protein S19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 40 1105
95 % 16 77 709
90 % 16 77 747
70 % 16 77 785
50 % 16 79 784
40 % 16 79 824
30 % 18 82 799
Entity #16 | Chains: SU
40S ribosomal protein S20 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 24 2422
95 % 5 26 2792
90 % 5 26 2879
70 % 5 26 2916
50 % 5 29 2588
40 % 5 33 2267
30 % 368 578 33
Entity #17 | Chains: SV
40S ribosomal protein S21 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 62 683
95 % 16 76 720
90 % 16 76 756
70 % 16 77 778
50 % 59 158 321
40 % 59 158 337
30 % 59 158 352
Entity #18 | Chains: SX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 76 538
95 % 16 80 671
90 % 16 81 700
70 % 68 191 208
50 % 69 197 219
40 % 69 197 228
30 % 69 197 244
Entity #19 | Chains: Sa
40S ribosomal protein S26 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2171
95 % 5 29 2467
90 % 5 29 2528
70 % 5 29 2573
50 % 42 81 535
40 % 42 81 573
30 % 42 81 596
Entity #2 | Chains: SA
40S ribosomal protein SA protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 18 3680
95 % 5 27 2677
90 % 5 27 2747
70 % 5 27 2765
50 % 17 56 1008
40 % 51 125 403
30 % 51 125 414
Entity #20 | Chains: Sc
40S ribosomal protein S28 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 59 731
95 % 15 59 1007
90 % 15 59 1044
70 % 66 178 247
50 % 68 185 232
40 % 69 186 241
30 % 69 186 257
Entity #21 | Chains: Sd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 71 578
95 % 16 75 736
90 % 16 75 774
70 % 60 155 278
50 % 62 166 294
40 % 62 166 306
30 % 62 166 328
Entity #22 | Chains: Sg
Receptor of activated protein C kinase 1 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 77 507
95 % 17 77 675
90 % 17 77 714
70 % 18 79 727
50 % 67 164 289
40 % 69 170 272
30 % 69 171 293
Entity #23 | Chains: SC
40S ribosomal protein S2 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 4768
95 % 5 29 2489
90 % 5 29 2506
70 % 5 32 2357
50 % 17 56 1012
40 % 17 56 1058
30 % 17 56 1104
Entity #24 | Chains: SG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 76 535
95 % 16 77 701
90 % 16 77 737
70 % 20 83 709
50 % 64 169 299
40 % 64 174 302
30 % 64 174 324
Entity #25 | Chains: SJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 77 527
95 % 16 77 715
90 % 16 77 750
70 % 66 172 256
50 % 68 187 230
40 % 68 191 235
30 % 68 191 248
Entity #26 | Chains: SM
40S ribosomal protein S12 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 18438
95 % 4 5 17700
90 % 4 5 17388
70 % 16 75 803
50 % 16 76 828
40 % 16 76 869
30 % 16 76 897
Entity #27 | Chains: SN
40S ribosomal protein S13 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 77 526
95 % 16 77 713
90 % 16 77 749
70 % 66 177 250
50 % 68 184 235
40 % 69 189 236
30 % 69 189 251
Entity #28 | Chains: SO
40S ribosomal protein S14 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 65 648
95 % 15 65 865
90 % 21 73 786
70 % 68 185 218
50 % 68 186 231
40 % 68 186 243
30 % 68 186 263
Entity #29 | Chains: SW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 78 512
95 % 16 78 699
90 % 16 78 733
70 % 67 188 225
50 % 69 190 228
40 % 70 195 231
30 % 436 752 22
Entity #3 | Chains: SB
40S ribosomal protein S3a protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 22 2822
95 % 5 26 2803
90 % 5 26 2889
70 % 5 26 2932
50 % 5 29 2579
40 % 5 29 2596
30 % 5 33 2319
Entity #30 | Chains: SY
40S ribosomal protein S24 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 72 569
95 % 16 77 714
90 % 16 77 744
70 % 16 78 771
50 % 63 179 266
40 % 63 179 281
30 % 63 179 307
Entity #31 | Chains: SZ
40S ribosomal protein S25 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 21 3010
95 % 4 21 3676
90 % 4 21 3735
70 % 4 21 3737
50 % 15 44 1245
40 % 15 44 1298
30 % 15 44 1334
Entity #32 | Chains: Sb
40S ribosomal protein S27 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 77 524
95 % 16 77 710
90 % 16 77 741
70 % 60 162 269
50 % 62 174 269
40 % 62 174 283
30 % 62 174 308
Entity #33 | Chains: Se
40S ribosomal protein S30 protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 36 1432
95 % 5 36 1869
90 % 5 49 1393
70 % 5 51 1366
50 % 67 161 358
40 % 67 161 375
30 % 67 161 386
Entity #34 | Chains: Sf
40S ribosomal protein S27a protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2333
95 % 5 29 2454
90 % 5 29 2511
70 % 43 72 615
50 % 43 76 631
40 % 43 76 665
30 % 43 76 696
Entity #35 | Chains: A
60S ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 659
95 % 11 68 899
90 % 11 68 940
70 % 58 166 271
50 % 59 179 270
40 % 127 250 193
30 % 127 250 203
Entity #36 | Chains: B
60S ribosomal protein L3 protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2287
95 % 11 68 898
90 % 11 68 939
70 % 11 69 956
50 % 60 190 233
40 % 60 190 244
30 % 60 192 256
Entity #37 | Chains: C
60S ribosomal protein L4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7303
95 % 9 39 1741
90 % 9 39 1766
70 % 9 39 1811
50 % 57 152 336
40 % 60 190 247
30 % 60 190 267
Entity #38 | Chains: D
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #39 | Chains: E
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: SD
40S ribosomal protein S3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 38 1148
95 % 10 67 833
90 % 10 67 875
70 % 10 68 902
50 % 55 158 320
40 % 55 158 335
30 % 55 158 351
Entity #40 | Chains: F
60S ribosomal protein L5 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2315
95 % 11 68 890
90 % 11 68 925
70 % 11 68 971
50 % 59 175 281
40 % 60 177 290
30 % 60 177 315
Entity #41 | Chains: G
60S ribosomal protein L6 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 15065
95 % 5 14 6202
90 % 5 24 3073
70 % 5 24 3290
50 % 5 24 3273
40 % 5 25 3089
30 % 5 25 3058
Entity #42 | Chains: H
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 32 1672
95 % 11 68 906
90 % 11 68 947
70 % 11 68 984
50 % 59 177 277
40 % 59 177 294
30 % 59 176 319
Entity #43 | Chains: I
60S ribosomal protein L7a protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2321
95 % 9 49 1351
90 % 9 49 1388
70 % 9 49 1413
50 % 60 161 325
40 % 60 163 334
30 % 60 163 350
Entity #44 | Chains: J
60S ribosomal protein L9 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 34 1542
95 % 11 68 908
90 % 11 68 948
70 % 11 68 987
50 % 58 185 258
40 % 59 187 258
30 % 127 258 198
Entity #45 | Chains: K
60S ribosomal protein L10 protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 14 4993
95 % 11 51 1297
90 % 11 68 931
70 % 11 80 801
50 % 58 168 301
40 % 58 168 315
30 % 58 168 336
Entity #46 | Chains: L
60S ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 61 768
95 % 12 69 879
90 % 12 69 907
70 % 60 178 253
50 % 62 182 259
40 % 62 182 274
30 % 62 182 298
Entity #47 | Chains: M
60S ribosomal protein L13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2288
95 % 11 67 925
90 % 11 67 969
70 % 11 67 1005
50 % 57 168 310
40 % 58 175 300
30 % 58 175 321
Entity #48 | Chains: N
60S ribosomal protein L14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7268
95 % 5 25 2945
90 % 5 28 2685
70 % 5 28 2715
50 % 5 28 2722
40 % 5 29 2612
30 % 5 29 2639
Entity #49 | Chains: O
60S ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 660
95 % 11 68 900
90 % 11 68 941
70 % 59 175 262
50 % 61 189 243
40 % 61 189 255
30 % 128 259 199
Entity #5 | Chains: SE
40S ribosomal protein S4, X isoform protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 51 863
95 % 15 65 868
90 % 16 77 748
70 % 63 167 264
50 % 65 178 257
40 % 65 182 261
30 % 66 187 262
Entity #50 | Chains: P
60S ribosomal protein L13a protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2311
95 % 11 68 889
90 % 11 68 954
70 % 11 68 970
50 % 59 177 273
40 % 59 178 288
30 % 59 178 312
Entity #51 | Chains: Q
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 24 2646
95 % 5 33 2110
90 % 5 33 2163
70 % 5 33 2183
50 % 59 187 246
40 % 59 187 259
30 % 59 187 281
Entity #52 | Chains: R
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2334
95 % 7 64 998
90 % 11 68 946
70 % 11 68 983
50 % 58 178 285
40 % 58 183 280
30 % 58 183 304
Entity #53 | Chains: S
60S ribosomal protein L19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 64 733
95 % 11 68 888
90 % 11 68 938
70 % 11 69 948
50 % 60 176 282
40 % 60 177 296
30 % 60 177 318
Entity #54 | Chains: T
60S ribosomal protein L18a protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2285
95 % 7 58 1120
90 % 7 58 1150
70 % 11 62 1094
50 % 57 168 312
40 % 58 169 316
30 % 58 170 335
Entity #55 | Chains: U
60S ribosomal protein L21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 67 681
95 % 11 68 901
90 % 11 68 927
70 % 11 69 964
50 % 58 167 311
40 % 58 173 312
30 % 60 180 302
Entity #56 | Chains: V
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 2974
95 % 5 29 2495
90 % 5 29 2561
70 % 5 29 2603
50 % 5 33 2290
40 % 17 56 1078
30 % 17 57 1091
Entity #57 | Chains: W
60S ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 675
95 % 11 68 910
90 % 11 68 949
70 % 59 189 224
50 % 59 190 237
40 % 59 190 250
30 % 59 190 269
Entity #58 | Chains: X
60S ribosomal protein L24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 7250
95 % 3 11 7768
90 % 3 11 7723
70 % 3 11 7537
50 % 9 18 3934
40 % 9 18 3888
30 % 9 18 3804
Entity #59 | Chains: Y
60S ribosomal protein L23a protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 2018
95 % 5 28 2650
90 % 5 28 2722
70 % 5 29 2602
50 % 17 53 1083
40 % 17 53 1116
30 % 17 53 1160
Entity #6 | Chains: SF
40S ribosomal protein S5 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 78 517
95 % 16 78 688
90 % 16 78 732
70 % 22 93 630
50 % 68 188 229
40 % 68 188 239
30 % 68 188 252
Entity #60 | Chains: Z
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 677
95 % 11 68 914
90 % 11 68 956
70 % 10 64 1068
50 % 59 184 255
40 % 59 184 269
30 % 59 184 291
Entity #61 | Chains: b
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2306
95 % 11 68 920
90 % 11 68 962
70 % 11 70 936
50 % 59 180 268
40 % 60 181 277
30 % 60 183 296
Entity #62 | Chains: c
60S ribosomal protein L29 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 13333
95 % 5 9 9731
90 % 5 9 9651
70 % 5 11 7731
50 % 5 11 7275
40 % 5 11 7006
30 % 5 11 6594
Entity #63 | Chains: d
60S ribosomal protein L30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 3012
95 % 5 28 2567
90 % 5 28 2633
70 % 12 74 891
50 % 55 141 350
40 % 55 141 363
30 % 55 141 379
Entity #64 | Chains: e
60S ribosomal protein L31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 2033
95 % 5 28 2518
90 % 5 28 2583
70 % 5 28 2620
50 % 59 177 276
40 % 59 177 293
30 % 59 177 317
Entity #65 | Chains: f
60S ribosomal protein L32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 672
95 % 11 68 895
90 % 11 68 935
70 % 11 69 955
50 % 60 181 264
40 % 60 185 266
30 % 60 186 283
Entity #66 | Chains: g
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1609
95 % 11 67 938
90 % 11 67 977
70 % 11 67 1014
50 % 57 173 298
40 % 58 175 308
30 % 58 175 331
Entity #67 | Chains: h
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 67 686
95 % 11 67 931
90 % 11 67 966
70 % 11 67 1003
50 % 57 162 326
40 % 57 162 340
30 % 57 162 356
Entity #68 | Chains: i
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2243
95 % 11 68 902
90 % 11 68 942
70 % 11 68 981
50 % 58 179 280
40 % 59 190 245
30 % 60 192 258
Entity #69 | Chains: j
60S ribosomal protein L36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1627
95 % 11 67 932
90 % 11 67 975
70 % 11 67 1009
50 % 11 69 993
40 % 58 170 314
30 % 58 180 311
Entity #7 | Chains: SH
40S ribosomal protein S7 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 76 530
95 % 16 77 706
90 % 16 77 743
70 % 16 78 769
50 % 65 175 279
40 % 65 175 295
30 % 67 178 294
Entity #70 | Chains: k
60S ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2299
95 % 5 32 2209
90 % 5 32 2292
70 % 5 32 2362
50 % 59 185 252
40 % 59 185 267
30 % 59 185 288
Entity #71 | Chains: l
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 63 741
95 % 11 67 928
90 % 11 67 972
70 % 11 70 939
50 % 11 70 978
40 % 11 70 1019
30 % 11 70 1064
Entity #72 | Chains: m
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 41 1222
95 % 11 68 917
90 % 11 68 959
70 % 58 168 267
50 % 59 181 263
40 % 59 183 271
30 % 60 184 292
Entity #73 | Chains: n
60S ribosomal protein L40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 35 1527
95 % 9 35 1969
90 % 9 36 1949
70 % 45 92 450
50 % 45 92 488
40 % 45 92 517
30 % 45 92 541
Entity #74 | Chains: o
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 72 567
95 % 14 75 732
90 % 14 75 761
70 % 57 152 286
50 % 57 152 335
40 % 57 152 348
30 % 57 152 361
Entity #75 | Chains: p
60S ribosomal protein L36a protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 654
95 % 11 68 892
90 % 11 68 929
70 % 58 166 270
50 % 60 173 291
40 % 60 174 299
30 % 60 174 320
Entity #76 | Chains: q
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 671
95 % 11 68 894
90 % 11 68 932
70 % 11 71 921
50 % 59 176 278
40 % 60 177 291
30 % 82 200 247
Entity #77 | Chains: r
60S ribosomal protein L28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2352
95 % 11 67 941
90 % 11 67 978
70 % 11 67 1015
50 % 11 67 1044
40 % 11 68 1074
30 % 11 70 1073
Entity #78 | Chains: t
28S ribosomal RNA rna, length: 3607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #79 | Chains: v
AA tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: SI
40S ribosomal protein S8 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 72 570
95 % 16 77 708
90 % 16 77 746
70 % 16 77 782
50 % 65 177 260
40 % 65 181 262
30 % 65 181 284
Entity #80 | Chains: w
mRNA rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #81 | Chains: y
Cadherin-1 protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 57972
95 % 2 3 29936
90 % 2 3 28807
70 % 2 3 26043
50 % 2 3 22874
40 % 2 3 20913
30 % 2 3 18729
Entity #82 | Chains: u
PE tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #83 | Chains: a
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 67 689
95 % 11 67 937
90 % 11 67 976
70 % 11 67 1011
50 % 57 163 323
40 % 58 176 297
30 % 59 178 316
Entity #9 | Chains: SK
40S ribosomal protein S10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2198
95 % 5 26 2797
90 % 5 26 2895
70 % 5 26 2988
50 % 5 27 2853
40 % 5 27 2849
30 % 5 27 2829

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures