6OLF

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs


Sequence Similarity Clusters for the Entities in PDB 6OLF

Entity #1 | Chains: S2
18S ribosomal RNA rna, length: 1714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: SL
40S ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 77 508
95 % 15 77 684
90 % 15 77 716
70 % 15 78 751
50 % 60 178 243
40 % 60 178 255
30 % 60 178 275
Entity #11 | Chains: SP
40S ribosomal protein S15 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7164
95 % 5 24 2984
90 % 5 24 3295
70 % 5 24 3257
50 % 55 160 312
40 % 56 165 309
30 % 56 165 328
Entity #12 | Chains: SQ
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 69 587
95 % 9 69 782
90 % 9 69 823
70 % 9 72 833
50 % 56 173 256
40 % 56 177 262
30 % 57 178 276
Entity #13 | Chains: SR
40S ribosomal protein S17 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 50 964
95 % 15 76 710
90 % 15 76 743
70 % 15 77 769
50 % 55 157 313
40 % 55 157 326
30 % 55 157 342
Entity #14 | Chains: SS
40S ribosomal protein S18 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 77 509
95 % 15 77 687
90 % 15 77 718
70 % 60 164 259
50 % 62 173 258
40 % 63 179 254
30 % 63 179 274
Entity #15 | Chains: ST
40S ribosomal protein S19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 40 1070
95 % 15 76 708
90 % 15 76 739
70 % 15 76 782
50 % 15 78 793
40 % 15 78 824
30 % 17 81 795
Entity #16 | Chains: SU
40S ribosomal protein S20 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 24 2381
95 % 5 26 2754
90 % 5 26 2837
70 % 5 26 2885
50 % 5 29 2564
40 % 5 33 2257
30 % 363 573 33
Entity #17 | Chains: SV
40S ribosomal protein S21 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 61 687
95 % 15 75 721
90 % 15 75 753
70 % 15 76 780
50 % 53 152 332
40 % 53 152 341
30 % 53 152 355
Entity #18 | Chains: SX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 75 540
95 % 15 79 665
90 % 15 80 692
70 % 62 185 212
50 % 63 191 224
40 % 63 191 234
30 % 63 191 246
Entity #19 | Chains: Sa
40S ribosomal protein S26 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2152
95 % 5 29 2442
90 % 5 29 2500
70 % 5 29 2542
50 % 41 80 532
40 % 41 80 573
30 % 41 80 594
Entity #2 | Chains: SA
40S ribosomal protein SA protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 18 3743
95 % 5 27 2672
90 % 5 27 2769
70 % 5 27 2775
50 % 16 55 1036
40 % 46 120 412
30 % 46 120 423
Entity #20 | Chains: Sc
40S ribosomal protein S28 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 58 724
95 % 14 58 1005
90 % 14 58 1047
70 % 60 172 249
50 % 62 179 242
40 % 63 180 251
30 % 63 180 268
Entity #21 | Chains: Sd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 70 572
95 % 15 74 734
90 % 15 74 762
70 % 54 150 283
50 % 54 158 315
40 % 54 158 327
30 % 54 158 343
Entity #22 | Chains: Sg
Receptor of activated protein C kinase 1 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 76 499
95 % 16 76 679
90 % 16 76 712
70 % 17 78 725
50 % 61 158 296
40 % 61 162 289
30 % 63 165 298
Entity #23 | Chains: SC
40S ribosomal protein S2 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 4664
95 % 5 29 2455
90 % 5 29 2512
70 % 5 32 2230
50 % 16 55 1019
40 % 16 55 1061
30 % 16 55 1100
Entity #24 | Chains: SG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 75 530
95 % 15 76 711
90 % 15 76 742
70 % 19 82 717
50 % 58 163 306
40 % 58 168 302
30 % 58 168 324
Entity #25 | Chains: SJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 76 516
95 % 15 76 709
90 % 15 76 741
70 % 60 166 256
50 % 62 181 235
40 % 62 185 242
30 % 62 185 254
Entity #26 | Chains: SM
40S ribosomal protein S12 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 17955
95 % 4 5 18310
90 % 4 5 17931
70 % 15 74 809
50 % 15 75 833
40 % 15 75 869
30 % 15 75 902
Entity #27 | Chains: SN
40S ribosomal protein S13 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 76 517
95 % 15 76 697
90 % 15 76 728
70 % 60 175 247
50 % 62 178 244
40 % 63 183 244
30 % 63 183 258
Entity #28 | Chains: SO
40S ribosomal protein S14 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 65 618
95 % 15 65 847
90 % 21 73 781
70 % 62 179 229
50 % 62 180 238
40 % 62 180 249
30 % 62 180 267
Entity #29 | Chains: SW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 77 501
95 % 15 77 683
90 % 15 77 715
70 % 61 182 232
50 % 63 184 230
40 % 64 189 237
30 % 425 741 22
Entity #3 | Chains: SB
40S ribosomal protein S3a protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 22 2742
95 % 5 26 2722
90 % 5 26 2797
70 % 5 26 2853
50 % 5 29 2577
40 % 5 29 2605
30 % 5 33 2249
Entity #30 | Chains: SY
40S ribosomal protein S24 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 71 562
95 % 15 76 707
90 % 15 76 738
70 % 15 77 763
50 % 57 173 271
40 % 57 173 283
30 % 57 173 306
Entity #31 | Chains: SZ
40S ribosomal protein S25 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 21 2939
95 % 4 21 3728
90 % 4 21 3667
70 % 4 21 3653
50 % 15 44 1230
40 % 15 44 1268
30 % 15 44 1310
Entity #32 | Chains: Sb
40S ribosomal protein S27 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 76 520
95 % 15 76 706
90 % 15 76 735
70 % 54 156 274
50 % 56 168 276
40 % 56 168 287
30 % 56 168 309
Entity #33 | Chains: Se
40S ribosomal protein S30 protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 36 1396
95 % 5 36 1893
90 % 5 49 1362
70 % 5 51 1358
50 % 62 156 368
40 % 62 156 387
30 % 62 156 396
Entity #34 | Chains: Sf
40S ribosomal protein S27a protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2300
95 % 5 29 2450
90 % 5 29 2467
70 % 42 71 626
50 % 42 75 631
40 % 42 75 661
30 % 42 75 690
Entity #35 | Chains: A
60S ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 689
95 % 9 66 935
90 % 9 66 977
70 % 51 159 276
50 % 52 172 278
40 % 120 243 200
30 % 120 243 210
Entity #36 | Chains: B
60S ribosomal protein L3 protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2268
95 % 9 66 925
90 % 9 66 966
70 % 9 67 987
50 % 53 183 246
40 % 53 183 256
30 % 53 185 271
Entity #37 | Chains: C
60S ribosomal protein L4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7067
95 % 9 39 1713
90 % 9 39 1746
70 % 9 39 1788
50 % 52 147 342
40 % 53 183 259
30 % 53 183 279
Entity #38 | Chains: D
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #39 | Chains: E
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: SD
40S ribosomal protein S3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 38 1126
95 % 9 66 839
90 % 9 66 873
70 % 9 67 898
50 % 49 152 330
40 % 49 152 339
30 % 49 152 354
Entity #40 | Chains: F
60S ribosomal protein L5 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2258
95 % 9 66 911
90 % 9 66 982
70 % 9 66 1000
50 % 52 168 293
40 % 53 170 295
30 % 53 170 316
Entity #41 | Chains: G
60S ribosomal protein L6 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 14716
95 % 5 14 5629
90 % 5 24 3083
70 % 5 24 3246
50 % 5 24 3219
40 % 5 25 3046
30 % 5 25 3006
Entity #42 | Chains: H
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 32 1635
95 % 9 66 928
90 % 9 66 969
70 % 9 66 1007
50 % 52 171 282
40 % 52 171 293
30 % 52 170 321
Entity #43 | Chains: I
60S ribosomal protein L7a protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 7633
95 % 9 49 1339
90 % 9 49 1367
70 % 9 49 1403
50 % 55 156 331
40 % 55 158 336
30 % 55 158 350
Entity #44 | Chains: J
60S ribosomal protein L9 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 34 1537
95 % 9 66 922
90 % 9 66 964
70 % 9 66 1003
50 % 51 178 269
40 % 52 179 273
30 % 396 719 25
Entity #45 | Chains: K
60S ribosomal protein L10 protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 14 4861
95 % 9 49 1334
90 % 9 66 978
70 % 9 78 826
50 % 51 161 311
40 % 51 161 323
30 % 51 161 340
Entity #46 | Chains: L
60S ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 59 818
95 % 10 67 895
90 % 10 67 937
70 % 53 171 254
50 % 55 175 267
40 % 126 251 195
30 % 126 251 204
Entity #47 | Chains: M
60S ribosomal protein L13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2309
95 % 9 65 953
90 % 9 65 995
70 % 9 65 1023
50 % 9 67 1030
40 % 51 168 307
30 % 51 168 326
Entity #48 | Chains: N
60S ribosomal protein L14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7046
95 % 5 25 2857
90 % 5 28 2581
70 % 5 28 2619
50 % 5 28 2647
40 % 5 29 2624
30 % 5 29 2605
Entity #49 | Chains: O
60S ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 688
95 % 9 66 934
90 % 9 66 976
70 % 52 168 264
50 % 54 182 252
40 % 54 182 266
30 % 54 182 288
Entity #5 | Chains: SE
40S ribosomal protein S4, X isoform protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 50 862
95 % 14 64 864
90 % 15 76 740
70 % 57 162 265
50 % 59 172 263
40 % 59 176 267
30 % 60 181 270
Entity #50 | Chains: P
60S ribosomal protein L13a protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2235
95 % 9 66 941
90 % 9 66 984
70 % 9 66 1015
50 % 52 170 284
40 % 52 171 291
30 % 52 171 313
Entity #51 | Chains: Q
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 24 2408
95 % 5 33 2077
90 % 5 33 2129
70 % 5 33 2192
50 % 52 180 254
40 % 52 180 272
30 % 52 180 293
Entity #52 | Chains: R
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2286
95 % 5 62 1008
90 % 9 66 954
70 % 9 66 1001
50 % 51 171 294
40 % 51 176 286
30 % 51 176 310
Entity #53 | Chains: S
60S ribosomal protein L19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 62 739
95 % 9 66 927
90 % 9 66 967
70 % 9 67 988
50 % 53 169 291
40 % 53 170 300
30 % 53 170 322
Entity #54 | Chains: T
60S ribosomal protein L18a protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2280
95 % 5 56 1139
90 % 5 56 1176
70 % 9 60 1133
50 % 50 161 321
40 % 51 162 324
30 % 51 163 335
Entity #55 | Chains: U
60S ribosomal protein L21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 65 697
95 % 9 66 929
90 % 9 66 970
70 % 9 67 992
50 % 51 160 323
40 % 51 166 319
30 % 53 173 308
Entity #56 | Chains: V
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 2924
95 % 5 29 2459
90 % 5 29 2517
70 % 5 29 2565
50 % 5 33 2252
40 % 16 55 1075
30 % 16 56 1078
Entity #57 | Chains: W
60S ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 672
95 % 9 66 907
90 % 9 66 949
70 % 52 182 237
50 % 119 253 178
40 % 119 253 193
30 % 119 253 202
Entity #58 | Chains: X
60S ribosomal protein L24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 7166
95 % 3 11 8005
90 % 3 11 7958
70 % 3 11 7762
50 % 3 11 7311
40 % 3 11 7067
30 % 3 11 6635
Entity #59 | Chains: Y
60S ribosomal protein L23a protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 1984
95 % 5 28 2613
90 % 5 28 2671
70 % 5 29 2564
50 % 16 52 1092
40 % 16 52 1114
30 % 16 52 1150
Entity #6 | Chains: SF
40S ribosomal protein S5 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 77 511
95 % 15 77 695
90 % 15 77 726
70 % 21 92 639
50 % 62 182 231
40 % 62 182 245
30 % 62 182 259
Entity #60 | Chains: Z
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 675
95 % 9 66 920
90 % 9 66 962
70 % 8 62 1078
50 % 52 177 262
40 % 52 177 279
30 % 52 177 300
Entity #61 | Chains: b
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2237
95 % 9 66 908
90 % 9 66 951
70 % 9 67 985
50 % 52 173 275
40 % 53 174 282
30 % 53 176 302
Entity #62 | Chains: c
60S ribosomal protein L29 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 13207
95 % 5 9 9693
90 % 5 9 9612
70 % 5 11 7684
50 % 5 11 7229
40 % 5 11 6995
30 % 5 11 6567
Entity #63 | Chains: d
60S ribosomal protein L30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 3001
95 % 5 28 2583
90 % 5 28 2639
70 % 10 72 901
50 % 50 136 362
40 % 50 136 379
30 % 50 136 388
Entity #64 | Chains: e
60S ribosomal protein L31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 2041
95 % 5 28 2575
90 % 5 28 2630
70 % 5 28 2605
50 % 52 170 286
40 % 52 170 296
30 % 52 170 318
Entity #65 | Chains: f
60S ribosomal protein L32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 677
95 % 9 66 937
90 % 9 66 979
70 % 9 67 989
50 % 53 174 273
40 % 53 178 278
30 % 53 179 294
Entity #66 | Chains: g
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1565
95 % 9 65 956
90 % 9 65 996
70 % 9 65 1024
50 % 50 166 309
40 % 51 168 315
30 % 51 168 331
Entity #67 | Chains: h
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 65 696
95 % 9 65 947
90 % 9 65 997
70 % 9 65 1026
50 % 50 155 337
40 % 50 155 345
30 % 50 155 358
Entity #68 | Chains: i
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2147
95 % 9 66 902
90 % 9 66 943
70 % 9 66 1004
50 % 51 172 288
40 % 52 183 257
30 % 53 185 272
Entity #69 | Chains: j
60S ribosomal protein L36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 33 1555
95 % 9 65 943
90 % 9 65 988
70 % 9 65 1019
50 % 9 67 1020
40 % 51 163 321
30 % 51 163 334
Entity #7 | Chains: SH
40S ribosomal protein S7 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 75 529
95 % 15 76 704
90 % 15 76 737
70 % 15 77 761
50 % 59 169 285
40 % 59 169 297
30 % 61 172 301
Entity #70 | Chains: k
60S ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2232
95 % 5 32 2115
90 % 5 32 2166
70 % 5 34 2058
50 % 52 178 259
40 % 52 178 276
30 % 52 178 297
Entity #71 | Chains: l
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 61 749
95 % 9 65 951
90 % 9 65 993
70 % 9 68 963
50 % 9 68 1003
40 % 9 68 1050
30 % 9 68 1086
Entity #72 | Chains: m
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 41 1202
95 % 9 66 913
90 % 9 66 955
70 % 51 162 267
50 % 52 174 272
40 % 52 176 281
30 % 53 177 299
Entity #73 | Chains: n
60S ribosomal protein L40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 35 1489
95 % 9 35 1945
90 % 9 36 1927
70 % 44 91 448
50 % 44 91 489
40 % 44 91 514
30 % 44 91 538
Entity #74 | Chains: o
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 70 574
95 % 12 73 742
90 % 12 73 774
70 % 50 145 288
50 % 50 145 343
40 % 50 145 355
30 % 50 145 369
Entity #75 | Chains: p
60S ribosomal protein L36a protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 667
95 % 9 66 923
90 % 9 66 950
70 % 51 157 281
50 % 53 169 289
40 % 52 169 299
30 % 53 170 320
Entity #76 | Chains: q
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 66 686
95 % 9 66 915
90 % 9 66 953
70 % 9 69 939
50 % 52 169 287
40 % 53 170 298
30 % 75 193 253
Entity #77 | Chains: r
60S ribosomal protein L28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2296
95 % 9 65 948
90 % 9 65 990
70 % 9 65 1021
50 % 9 65 1061
40 % 9 66 1083
30 % 9 68 1084
Entity #78 | Chains: t
28S ribosomal RNA rna, length: 3607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #79 | Chains: v
AA tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: SI
40S ribosomal protein S8 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 71 557
95 % 15 76 700
90 % 15 76 732
70 % 15 76 774
50 % 59 171 265
40 % 59 175 270
30 % 59 175 291
Entity #80 | Chains: w
mRNA rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #81 | Chains: y
Cadherin-1 protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48405
95 % 2 3 28902
90 % 2 3 26879
70 % 2 3 25164
50 % 2 3 22109
40 % 2 3 19466
30 % 2 3 17321
Entity #82 | Chains: u
PE tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #83 | Chains: a
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 65 704
95 % 9 65 955
90 % 9 65 1003
70 % 9 65 1033
50 % 50 156 334
40 % 51 169 301
30 % 52 171 319
Entity #9 | Chains: SK
40S ribosomal protein S10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2159
95 % 5 26 2800
90 % 5 26 2882
70 % 5 26 2934
50 % 5 27 2809
40 % 5 27 2809
30 % 5 27 2781

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures