6OLF

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs


Sequence Similarity Clusters for the Entities in PDB 6OLF

Entity #1 | Chains: S2
18S ribosomal RNA rna, length: 1714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: SL
40S ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 86 508
95 % 24 86 679
90 % 24 86 704
70 % 24 87 725
50 % 79 197 242
40 % 79 197 253
30 % 79 197 266
Entity #11 | Chains: SP
40S ribosomal protein S15 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7800
95 % 24 84 705
90 % 24 84 737
70 % 24 86 735
50 % 74 179 298
40 % 78 187 286
30 % 78 187 305
Entity #12 | Chains: SQ
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 76 582
95 % 16 76 782
90 % 16 76 814
70 % 16 79 809
50 % 73 190 251
40 % 77 198 251
30 % 78 199 262
Entity #13 | Chains: SR
40S ribosomal protein S17 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 55 864
95 % 24 85 693
90 % 24 85 723
70 % 24 86 738
50 % 74 176 301
40 % 74 176 310
30 % 74 176 331
Entity #14 | Chains: SS
40S ribosomal protein S18 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 86 502
95 % 24 86 672
90 % 24 86 697
70 % 79 183 254
50 % 81 192 248
40 % 86 202 241
30 % 86 202 255
Entity #15 | Chains: ST
40S ribosomal protein S19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 43 1077
95 % 24 85 689
90 % 24 85 721
70 % 24 85 752
50 % 74 174 306
40 % 74 174 317
30 % 76 177 324
Entity #16 | Chains: SU
40S ribosomal protein S20 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 25 2431
95 % 6 27 2835
90 % 6 27 2905
70 % 6 27 2936
50 % 6 30 2637
40 % 10 38 2039
30 % 401 611 30
Entity #17 | Chains: SV
40S ribosomal protein S21 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 65 700
95 % 24 84 707
90 % 24 84 739
70 % 24 85 745
50 % 72 171 316
40 % 72 171 328
30 % 72 171 345
Entity #18 | Chains: SX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 84 522
95 % 24 88 658
90 % 24 89 680
70 % 81 204 214
50 % 86 214 219
40 % 86 214 228
30 % 86 214 239
Entity #19 | Chains: Sa
40S ribosomal protein S26 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 26 2297
95 % 6 30 2449
90 % 6 30 2507
70 % 6 30 2577
50 % 46 85 548
40 % 46 85 583
30 % 46 85 603
Entity #2 | Chains: SA
40S ribosomal protein SA protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 21 3085
95 % 8 30 2465
90 % 8 30 2579
70 % 8 30 2631
50 % 23 62 977
40 % 59 133 402
30 % 59 133 416
Entity #20 | Chains: Sc
40S ribosomal protein S28 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 67 673
95 % 23 67 907
90 % 23 67 939
70 % 79 191 246
50 % 85 202 229
40 % 86 203 240
30 % 86 203 253
Entity #21 | Chains: Sd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 79 554
95 % 24 83 718
90 % 24 83 749
70 % 73 168 279
50 % 73 177 302
40 % 73 177 311
30 % 73 177 332
Entity #22 | Chains: Sg
Receptor of activated protein C kinase 1 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 85 492
95 % 25 85 659
90 % 25 85 690
70 % 26 87 708
50 % 79 176 278
40 % 79 180 282
30 % 81 183 282
Entity #23 | Chains: SC
40S ribosomal protein S2 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 15 5049
95 % 8 32 2265
90 % 8 32 2323
70 % 8 35 2159
50 % 23 62 966
40 % 23 62 1013
30 % 23 62 1051
Entity #24 | Chains: SG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 84 525
95 % 24 85 683
90 % 24 85 710
70 % 28 91 691
50 % 77 182 294
40 % 77 187 288
30 % 77 187 307
Entity #25 | Chains: SJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 85 513
95 % 24 85 699
90 % 24 85 730
70 % 79 185 250
50 % 81 200 233
40 % 85 208 233
30 % 85 208 246
Entity #26 | Chains: SM
40S ribosomal protein S12 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 18892
95 % 4 5 17873
90 % 4 5 17552
70 % 23 82 773
50 % 23 83 806
40 % 23 83 833
30 % 23 83 872
Entity #27 | Chains: SN
40S ribosomal protein S13 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 85 514
95 % 24 85 701
90 % 24 85 732
70 % 79 194 240
50 % 81 197 243
40 % 85 205 237
30 % 86 206 249
Entity #28 | Chains: SO
40S ribosomal protein S14 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 73 608
95 % 23 73 818
90 % 29 81 762
70 % 81 198 224
50 % 81 199 237
40 % 81 199 247
30 % 81 199 260
Entity #29 | Chains: SW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 86 505
95 % 24 86 673
90 % 24 86 698
70 % 80 201 232
50 % 87 212 221
40 % 89 214 227
30 % 89 214 238
Entity #3 | Chains: SB
40S ribosomal protein S3a protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 22 2930
95 % 6 27 2844
90 % 6 27 2918
70 % 6 27 2953
50 % 6 30 2658
40 % 6 30 2668
30 % 10 38 2049
Entity #30 | Chains: SY
40S ribosomal protein S24 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 77 577
95 % 24 85 687
90 % 24 85 718
70 % 24 86 740
50 % 76 192 263
40 % 76 192 276
30 % 76 192 291
Entity #31 | Chains: SZ
40S ribosomal protein S25 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 23 2864
95 % 6 23 3588
90 % 6 23 3650
70 % 6 23 3653
50 % 6 23 3605
40 % 6 23 3562
30 % 6 26 3048
Entity #32 | Chains: Sb
40S ribosomal protein S27 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 85 509
95 % 24 85 682
90 % 24 85 709
70 % 73 175 270
50 % 75 187 264
40 % 75 187 277
30 % 75 187 293
Entity #33 | Chains: Se
40S ribosomal protein S30 protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 39 1380
95 % 8 39 1826
90 % 10 54 1314
70 % 10 56 1302
50 % 77 171 358
40 % 77 171 372
30 % 77 171 387
Entity #34 | Chains: Sf
40S ribosomal protein S27a protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2119
95 % 8 32 2342
90 % 8 32 2398
70 % 49 78 625
50 % 49 82 625
40 % 49 82 660
30 % 49 82 683
Entity #35 | Chains: A
60S ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 679
95 % 14 71 933
90 % 14 71 947
70 % 65 173 282
50 % 66 186 277
40 % 134 257 201
30 % 134 257 213
Entity #36 | Chains: B
60S ribosomal protein L3 protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2208
95 % 14 71 931
90 % 14 71 963
70 % 14 72 979
50 % 67 197 250
40 % 67 197 262
30 % 67 199 273
Entity #37 | Chains: C
60S ribosomal protein L4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7749
95 % 9 39 1837
90 % 9 39 1840
70 % 9 39 1888
50 % 61 156 345
40 % 67 197 263
30 % 67 197 279
Entity #38 | Chains: D
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #39 | Chains: E
5S ribosomal RNA rna, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: SD
40S ribosomal protein S3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 41 1153
95 % 16 73 820
90 % 16 73 850
70 % 16 74 871
50 % 65 168 322
40 % 65 168 334
30 % 65 168 349
Entity #40 | Chains: F
60S ribosomal protein L5 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2141
95 % 14 71 923
90 % 14 71 953
70 % 14 71 987
50 % 66 182 292
40 % 67 184 293
30 % 67 184 316
Entity #41 | Chains: G
60S ribosomal protein L6 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 15156
95 % 5 14 5973
90 % 5 24 3248
70 % 5 24 3394
50 % 5 24 3360
40 % 5 25 3232
30 % 5 25 3196
Entity #42 | Chains: H
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 35 1601
95 % 14 71 924
90 % 14 71 955
70 % 14 71 989
50 % 66 184 284
40 % 66 184 298
30 % 66 183 327
Entity #43 | Chains: I
60S ribosomal protein L7a protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 10 8174
95 % 12 52 1332
90 % 12 52 1371
70 % 12 52 1400
50 % 67 168 327
40 % 67 170 336
30 % 67 170 353
Entity #44 | Chains: J
60S ribosomal protein L9 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 37 1460
95 % 14 71 921
90 % 14 71 948
70 % 14 71 986
50 % 65 192 268
40 % 66 193 273
30 % 134 265 205
Entity #45 | Chains: K
60S ribosomal protein L10 protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 14 5217
95 % 14 71 915
90 % 14 71 958
70 % 14 79 873
50 % 65 175 311
40 % 65 175 323
30 % 65 175 341
Entity #46 | Chains: L
60S ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 64 780
95 % 15 72 902
90 % 15 72 934
70 % 67 185 261
50 % 69 189 269
40 % 69 189 283
30 % 69 189 303
Entity #47 | Chains: M
60S ribosomal protein L13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2195
95 % 14 70 937
90 % 14 70 966
70 % 14 70 1001
50 % 14 72 999
40 % 65 182 306
30 % 65 182 329
Entity #48 | Chains: N
60S ribosomal protein L14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 7574
95 % 5 25 3112
90 % 5 28 2761
70 % 5 28 2806
50 % 5 28 2820
40 % 5 29 2767
30 % 5 29 2759
Entity #49 | Chains: O
60S ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 684
95 % 14 71 918
90 % 14 71 944
70 % 66 182 266
50 % 68 196 255
40 % 68 196 268
30 % 68 196 285
Entity #5 | Chains: SE
40S ribosomal protein S4, X isoform protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 54 878
95 % 23 73 810
90 % 24 85 712
70 % 76 181 260
50 % 78 191 252
40 % 78 195 258
30 % 83 204 254
Entity #50 | Chains: P
60S ribosomal protein L13a protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2197
95 % 14 71 935
90 % 14 71 965
70 % 14 71 999
50 % 66 184 282
40 % 66 185 292
30 % 66 185 312
Entity #51 | Chains: Q
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 24 2509
95 % 5 33 2191
90 % 5 33 2246
70 % 5 33 2315
50 % 66 194 260
40 % 66 194 271
30 % 66 194 287
Entity #52 | Chains: R
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2121
95 % 10 67 987
90 % 14 71 962
70 % 14 71 998
50 % 65 185 293
40 % 65 190 289
30 % 65 190 306
Entity #53 | Chains: S
60S ribosomal protein L19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 68 725
95 % 15 72 888
90 % 15 72 921
70 % 15 73 947
50 % 68 184 285
40 % 68 185 297
30 % 68 185 321
Entity #54 | Chains: T
60S ribosomal protein L18a protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2206
95 % 10 61 1103
90 % 10 61 1145
70 % 14 65 1115
50 % 64 175 317
40 % 65 176 321
30 % 65 177 335
Entity #55 | Chains: U
60S ribosomal protein L21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 70 694
95 % 14 71 930
90 % 14 71 956
70 % 14 72 978
50 % 65 174 320
40 % 65 180 316
30 % 67 187 308
Entity #56 | Chains: V
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 3109
95 % 5 29 2612
90 % 5 29 2676
70 % 5 29 2727
50 % 5 33 2405
40 % 20 59 1068
30 % 20 60 1083
Entity #57 | Chains: W
60S ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 680
95 % 14 71 922
90 % 14 71 951
70 % 66 196 239
50 % 133 267 178
40 % 133 267 191
30 % 133 267 204
Entity #58 | Chains: X
60S ribosomal protein L24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 7516
95 % 3 11 8151
90 % 3 11 8112
70 % 3 11 7875
50 % 13 22 3041
40 % 13 22 3076
30 % 13 22 3049
Entity #59 | Chains: Y
60S ribosomal protein L23a protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 2157
95 % 5 28 2777
90 % 5 28 2849
70 % 5 29 2726
50 % 20 56 1100
40 % 20 56 1133
30 % 20 56 1178
Entity #6 | Chains: SF
40S ribosomal protein S5 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 86 498
95 % 24 86 675
90 % 24 86 701
70 % 30 101 614
50 % 81 201 232
40 % 81 201 244
30 % 81 201 258
Entity #60 | Chains: Z
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 72 663
95 % 15 72 893
90 % 15 72 925
70 % 14 68 1049
50 % 67 192 266
40 % 67 192 280
30 % 67 192 296
Entity #61 | Chains: b
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2160
95 % 14 71 920
90 % 14 71 946
70 % 14 72 973
50 % 66 187 274
40 % 67 188 285
30 % 67 190 299
Entity #62 | Chains: c
60S ribosomal protein L29 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 13175
95 % 5 9 9957
90 % 5 9 9880
70 % 5 11 7931
50 % 5 11 7488
40 % 5 11 7178
30 % 5 11 6738
Entity #63 | Chains: d
60S ribosomal protein L30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 21 3112
95 % 5 28 2780
90 % 5 28 2786
70 % 15 77 898
50 % 59 145 363
40 % 59 145 377
30 % 59 145 391
Entity #64 | Chains: e
60S ribosomal protein L31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 28 2116
95 % 5 28 2754
90 % 5 28 2826
70 % 5 28 2863
50 % 66 184 283
40 % 66 184 296
30 % 66 184 320
Entity #65 | Chains: f
60S ribosomal protein L32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 677
95 % 14 71 910
90 % 14 71 954
70 % 14 72 966
50 % 67 188 271
40 % 67 192 278
30 % 67 193 290
Entity #66 | Chains: g
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 36 1512
95 % 14 70 948
90 % 14 70 978
70 % 14 70 1016
50 % 64 180 308
40 % 65 182 312
30 % 65 182 333
Entity #67 | Chains: h
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 70 688
95 % 14 70 943
90 % 14 70 973
70 % 14 70 1008
50 % 64 169 329
40 % 64 169 341
30 % 64 169 360
Entity #68 | Chains: i
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 30 1912
95 % 15 72 885
90 % 15 72 919
70 % 15 72 962
50 % 66 187 279
40 % 67 198 261
30 % 68 200 270
Entity #69 | Chains: j
60S ribosomal protein L36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 36 1556
95 % 14 70 942
90 % 14 70 972
70 % 14 70 1007
50 % 14 72 1000
40 % 65 177 318
30 % 65 177 339
Entity #7 | Chains: SH
40S ribosomal protein S7 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 84 523
95 % 24 85 696
90 % 24 85 711
70 % 24 86 739
50 % 78 188 270
40 % 78 188 284
30 % 80 191 283
Entity #70 | Chains: k
60S ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 25 2445
95 % 5 32 2322
90 % 5 32 2383
70 % 5 32 2453
50 % 66 192 265
40 % 66 192 279
30 % 66 192 295
Entity #71 | Chains: l
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 67 740
95 % 15 71 934
90 % 15 71 964
70 % 15 74 935
50 % 15 74 976
40 % 15 74 1006
30 % 15 74 1057
Entity #72 | Chains: m
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 44 1209
95 % 14 71 913
90 % 14 71 941
70 % 65 176 277
50 % 66 188 273
40 % 66 190 281
30 % 67 191 297
Entity #73 | Chains: n
60S ribosomal protein L40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 35 1617
95 % 9 35 2059
90 % 9 36 2051
70 % 48 95 471
50 % 48 95 510
40 % 48 95 546
30 % 48 95 571
Entity #74 | Chains: o
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 78 569
95 % 20 81 732
90 % 20 81 767
70 % 67 162 285
50 % 67 162 335
40 % 67 162 348
30 % 67 162 365
Entity #75 | Chains: p
60S ribosomal protein L36a protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 683
95 % 14 71 929
90 % 14 71 961
70 % 65 173 281
50 % 67 180 300
40 % 67 181 308
30 % 67 181 330
Entity #76 | Chains: q
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 71 678
95 % 14 71 914
90 % 14 71 942
70 % 14 74 932
50 % 66 183 286
40 % 67 184 294
30 % 89 207 257
Entity #77 | Chains: r
60S ribosomal protein L28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 28 2102
95 % 14 70 950
90 % 14 70 980
70 % 14 70 1019
50 % 14 70 1054
40 % 14 71 1064
30 % 14 73 1075
Entity #78 | Chains: t
28S ribosomal RNA rna, length: 3607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #79 | Chains: v
AA tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: SI
40S ribosomal protein S8 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 77 573
95 % 24 85 685
90 % 24 85 713
70 % 24 85 743
50 % 78 190 256
40 % 78 194 260
30 % 78 194 275
Entity #80 | Chains: w
mRNA rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #81 | Chains: y
Cadherin-1 protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 60136
95 % 2 3 31115
90 % 2 3 29871
70 % 2 3 26883
50 % 2 3 23551
40 % 2 3 21535
30 % 2 3 19284
Entity #82 | Chains: u
PE tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #83 | Chains: a
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 70 699
95 % 14 70 945
90 % 14 70 975
70 % 14 70 1013
50 % 64 170 326
40 % 65 183 303
30 % 66 185 319
Entity #9 | Chains: SK
40S ribosomal protein S10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 29 2013
95 % 8 29 2592
90 % 8 29 2650
70 % 8 29 2700
50 % 8 30 2668
40 % 8 30 2679
30 % 8 30 2672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures