6OM7

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs


Sequence Similarity Clusters for the Entities in PDB 6OM7

Entity #1 | Chains: S2
18S ribosomal RNA rna, length: 1714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: SL
40S ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 502
95 % 12 78 688
90 % 12 78 725
70 % 12 79 739
50 % 57 179 243
40 % 57 179 253
30 % 57 179 273
Entity #11 | Chains: SP
40S ribosomal protein S15 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7162
95 % 1 24 2966
90 % 1 24 3047
70 % 1 24 3093
50 % 52 161 312
40 % 53 166 308
30 % 53 166 326
Entity #12 | Chains: SQ
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 70 573
95 % 6 70 780
90 % 6 70 820
70 % 6 73 826
50 % 53 174 256
40 % 53 178 259
30 % 54 179 276
Entity #13 | Chains: SR
40S ribosomal protein S17 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 51 942
95 % 12 77 691
90 % 12 77 728
70 % 12 78 752
50 % 52 158 314
40 % 52 158 325
30 % 52 158 343
Entity #14 | Chains: SS
40S ribosomal protein S18 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 504
95 % 12 78 680
90 % 12 78 717
70 % 57 165 258
50 % 59 174 257
40 % 60 180 252
30 % 60 180 272
Entity #15 | Chains: ST
40S ribosomal protein S19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 40 1074
95 % 12 77 702
90 % 12 77 743
70 % 12 77 774
50 % 52 156 323
40 % 52 156 333
30 % 54 160 329
Entity #16 | Chains: SU
40S ribosomal protein S20 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 2399
95 % 1 26 2787
90 % 1 26 2847
70 % 1 26 2895
50 % 1 29 2592
40 % 1 33 2291
30 % 361 575 33
Entity #17 | Chains: SV
40S ribosomal protein S21 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 62 670
95 % 12 76 712
90 % 12 76 748
70 % 12 77 772
50 % 50 153 330
40 % 50 153 340
30 % 50 153 355
Entity #18 | Chains: SX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 524
95 % 12 80 664
90 % 12 81 695
70 % 59 186 212
50 % 60 192 224
40 % 60 192 235
30 % 60 192 244
Entity #19 | Chains: Sa
40S ribosomal protein S26 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2213
95 % 1 29 2437
90 % 1 29 2516
70 % 1 29 2557
50 % 37 80 536
40 % 37 80 574
30 % 37 80 600
Entity #2 | Chains: SA
40S ribosomal protein SA protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 3795
95 % 1 27 2686
90 % 1 27 2781
70 % 1 27 2783
50 % 12 55 1042
40 % 42 120 413
30 % 42 120 426
Entity #20 | Chains: Sc
40S ribosomal protein S28 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 59 716
95 % 12 59 973
90 % 12 59 1014
70 % 57 173 248
50 % 59 180 241
40 % 60 181 248
30 % 60 181 269
Entity #21 | Chains: Sd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 71 568
95 % 12 75 725
90 % 12 75 758
70 % 51 151 281
50 % 51 159 315
40 % 51 159 327
30 % 51 159 345
Entity #22 | Chains: Sg
Receptor of activated protein C kinase 1 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 77 489
95 % 13 77 674
90 % 13 77 708
70 % 14 79 722
50 % 58 159 294
40 % 60 165 278
30 % 60 166 296
Entity #23 | Chains: SC
40S ribosomal protein S2 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 4493
95 % 1 29 2434
90 % 1 29 2491
70 % 1 32 2349
50 % 12 55 1023
40 % 12 55 1057
30 % 12 55 1106
Entity #24 | Chains: SG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 522
95 % 12 77 697
90 % 12 77 735
70 % 16 83 707
50 % 55 164 305
40 % 55 169 303
30 % 55 169 323
Entity #25 | Chains: SJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 508
95 % 12 77 704
90 % 12 77 741
70 % 57 167 255
50 % 59 182 234
40 % 59 186 240
30 % 59 186 252
Entity #26 | Chains: SM
40S ribosomal protein S12 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 18117
95 % 1 5 18421
90 % 1 5 18060
70 % 12 75 802
50 % 12 76 826
40 % 12 76 859
30 % 12 76 897
Entity #27 | Chains: SN
40S ribosomal protein S13 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 510
95 % 12 77 695
90 % 12 77 733
70 % 57 172 249
50 % 59 179 244
40 % 60 184 242
30 % 60 184 254
Entity #28 | Chains: SO
40S ribosomal protein S14 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 65 620
95 % 11 65 849
90 % 17 73 788
70 % 59 180 226
50 % 59 181 236
40 % 59 181 247
30 % 59 181 263
Entity #29 | Chains: SW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 500
95 % 12 78 683
90 % 12 78 720
70 % 58 182 235
50 % 61 190 227
40 % 61 190 237
30 % 424 744 24
Entity #3 | Chains: SB
40S ribosomal protein S3a protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 2802
95 % 1 26 2741
90 % 1 26 2818
70 % 1 26 2863
50 % 1 29 2558
40 % 1 29 2581
30 % 1 33 2273
Entity #30 | Chains: SY
40S ribosomal protein S24 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 72 559
95 % 12 77 696
90 % 12 77 734
70 % 12 78 753
50 % 54 174 272
40 % 54 174 284
30 % 54 174 306
Entity #31 | Chains: SZ
40S ribosomal protein S25 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2970
95 % 1 21 3625
90 % 1 21 3684
70 % 1 21 3674
50 % 12 44 1239
40 % 12 44 1273
30 % 12 44 1315
Entity #32 | Chains: Sb
40S ribosomal protein S27 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 512
95 % 12 77 700
90 % 12 77 739
70 % 51 157 274
50 % 53 169 274
40 % 53 169 286
30 % 53 169 307
Entity #33 | Chains: Se
40S ribosomal protein S30 protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 1429
95 % 1 36 1834
90 % 1 49 1382
70 % 1 51 1360
50 % 58 156 366
40 % 58 156 385
30 % 58 156 395
Entity #34 | Chains: Sf
40S ribosomal protein S27a protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2308
95 % 1 29 2471
90 % 1 29 2528
70 % 38 71 630
50 % 38 75 636
40 % 38 75 661
30 % 38 75 695
Entity #35 | Chains: A
60S ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 647
95 % 7 68 908
90 % 7 68 919
70 % 49 161 273
50 % 50 174 275
40 % 118 245 197
30 % 118 245 208
Entity #36 | Chains: B
60S ribosomal protein L3 protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2303
95 % 7 68 880
90 % 7 68 923
70 % 7 69 945
50 % 51 185 242
40 % 51 185 254
30 % 51 187 265
Entity #37 | Chains: C
60S ribosomal protein L4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7402
95 % 5 39 1711
90 % 5 39 1740
70 % 5 39 1789
50 % 48 147 343
40 % 51 185 256
30 % 51 185 275
Entity #38 | Chains: D
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #39 | Chains: E
5S ribosomal RNA rna, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: SD
40S ribosomal protein S3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 38 1150
95 % 6 67 821
90 % 6 67 861
70 % 6 68 895
50 % 46 153 329
40 % 46 153 339
30 % 46 153 353
Entity #40 | Chains: F
60S ribosomal protein L5 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2282
95 % 7 68 882
90 % 7 68 931
70 % 7 68 972
50 % 50 170 292
40 % 51 172 291
30 % 51 172 312
Entity #41 | Chains: G
60S ribosomal protein L6 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14304
95 % 1 14 5665
90 % 1 24 3095
70 % 1 24 3182
50 % 1 24 3171
40 % 1 25 3059
30 % 1 25 3025
Entity #42 | Chains: H
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1651
95 % 7 68 892
90 % 7 68 934
70 % 7 68 978
50 % 50 173 280
40 % 50 173 290
30 % 50 172 317
Entity #43 | Chains: I
60S ribosomal protein L7a protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2292
95 % 5 49 1344
90 % 5 49 1375
70 % 5 49 1401
50 % 51 156 335
40 % 51 158 338
30 % 51 158 354
Entity #44 | Chains: J
60S ribosomal protein L9 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 34 1512
95 % 7 68 888
90 % 7 68 911
70 % 7 68 959
50 % 49 180 264
40 % 117 252 192
30 % 118 253 199
Entity #45 | Chains: K
60S ribosomal protein L10 protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 14 4869
95 % 7 51 1280
90 % 7 68 943
70 % 7 80 803
50 % 49 163 310
40 % 49 163 321
30 % 49 163 336
Entity #46 | Chains: L
60S ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 61 757
95 % 8 69 866
90 % 8 69 908
70 % 51 173 254
50 % 53 177 266
40 % 53 177 281
30 % 53 177 300
Entity #47 | Chains: M
60S ribosomal protein L13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2301
95 % 7 67 914
90 % 7 67 958
70 % 7 67 996
50 % 7 69 989
40 % 49 170 302
30 % 49 170 322
Entity #48 | Chains: N
60S ribosomal protein L14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7112
95 % 1 25 2898
90 % 1 28 2611
70 % 1 28 2651
50 % 1 28 2662
40 % 1 29 2637
30 % 1 29 2625
Entity #49 | Chains: O
60S ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 657
95 % 7 68 907
90 % 7 68 952
70 % 50 170 261
50 % 52 184 247
40 % 52 184 262
30 % 52 184 281
Entity #5 | Chains: SE
40S ribosomal protein S4, X isoform protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 51 851
95 % 12 65 859
90 % 12 77 740
70 % 54 163 264
50 % 56 173 263
40 % 56 177 266
30 % 57 182 270
Entity #50 | Chains: P
60S ribosomal protein L13a protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2247
95 % 7 68 909
90 % 7 68 915
70 % 7 68 993
50 % 50 172 281
40 % 50 173 289
30 % 50 173 311
Entity #51 | Chains: Q
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 2367
95 % 1 33 2068
90 % 1 33 2127
70 % 1 33 2174
50 % 50 182 251
40 % 50 182 265
30 % 50 182 284
Entity #52 | Chains: R
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2275
95 % 3 64 969
90 % 7 68 913
70 % 7 69 940
50 % 49 173 291
40 % 49 178 283
30 % 49 178 304
Entity #53 | Chains: S
60S ribosomal protein L19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 64 711
95 % 7 68 896
90 % 7 68 938
70 % 7 69 941
50 % 51 171 290
40 % 51 172 300
30 % 51 172 321
Entity #54 | Chains: T
60S ribosomal protein L18a protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2257
95 % 3 58 1114
90 % 3 58 1144
70 % 7 62 1089
50 % 48 163 322
40 % 49 164 322
30 % 49 165 335
Entity #55 | Chains: U
60S ribosomal protein L21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 676
95 % 7 68 891
90 % 7 68 937
70 % 7 69 956
50 % 49 162 321
40 % 49 168 316
30 % 51 175 301
Entity #56 | Chains: V
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2945
95 % 1 29 2483
90 % 1 29 2542
70 % 1 29 2583
50 % 1 33 2273
40 % 12 55 1072
30 % 12 56 1097
Entity #57 | Chains: W
60S ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 666
95 % 7 68 893
90 % 7 68 935
70 % 50 184 232
50 % 50 185 245
40 % 50 185 257
30 % 50 185 277
Entity #58 | Chains: X
60S ribosomal protein L24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7180
95 % 1 11 7997
90 % 1 11 7956
70 % 1 11 7758
50 % 1 11 7173
40 % 1 14 5590
30 % 1 14 5349
Entity #59 | Chains: Y
60S ribosomal protein L23a protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 2026
95 % 1 28 2627
90 % 1 28 2691
70 % 1 29 2578
50 % 12 52 1098
40 % 12 52 1109
30 % 12 52 1156
Entity #6 | Chains: SF
40S ribosomal protein S5 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 499
95 % 12 78 681
90 % 12 78 718
70 % 18 93 624
50 % 59 183 230
40 % 59 183 243
30 % 59 183 258
Entity #60 | Chains: Z
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 653
95 % 7 68 884
90 % 7 68 933
70 % 7 64 1050
50 % 50 179 260
40 % 50 179 276
30 % 50 179 293
Entity #61 | Chains: a
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 672
95 % 7 67 929
90 % 7 67 972
70 % 7 67 1010
50 % 48 158 332
40 % 49 171 301
30 % 50 173 315
Entity #62 | Chains: b
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2280
95 % 7 68 889
90 % 7 68 912
70 % 7 70 929
50 % 50 175 271
40 % 51 176 282
30 % 51 178 298
Entity #63 | Chains: c
60S ribosomal protein L29 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 12838
95 % 1 9 9222
90 % 1 9 9806
70 % 1 11 7605
50 % 1 11 7347
40 % 1 11 7095
30 % 1 11 6662
Entity #64 | Chains: d
60S ribosomal protein L30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 2948
95 % 1 28 2632
90 % 1 28 2633
70 % 8 74 866
50 % 46 136 363
40 % 46 136 377
30 % 46 136 387
Entity #65 | Chains: e
60S ribosomal protein L31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 1957
95 % 1 28 2568
90 % 1 28 2631
70 % 1 28 2664
50 % 50 172 282
40 % 50 172 292
30 % 50 172 314
Entity #66 | Chains: f
60S ribosomal protein L32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 664
95 % 7 68 885
90 % 7 68 910
70 % 7 69 939
50 % 51 176 269
40 % 51 180 272
30 % 51 181 289
Entity #67 | Chains: g
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 33 1612
95 % 7 67 913
90 % 7 67 954
70 % 7 67 1000
50 % 48 168 304
40 % 49 170 310
30 % 49 170 327
Entity #68 | Chains: h
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 669
95 % 7 67 924
90 % 7 67 965
70 % 7 67 1004
50 % 48 157 334
40 % 48 157 343
30 % 48 157 357
Entity #69 | Chains: i
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2211
95 % 7 68 876
90 % 7 68 928
70 % 7 68 973
50 % 49 174 284
40 % 50 185 255
30 % 51 187 266
Entity #7 | Chains: SH
40S ribosomal protein S7 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 527
95 % 12 77 703
90 % 12 77 736
70 % 12 78 758
50 % 56 170 287
40 % 56 170 297
30 % 58 173 299
Entity #70 | Chains: j
60S ribosomal protein L36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 33 1581
95 % 7 67 930
90 % 7 67 968
70 % 7 67 1011
50 % 7 69 984
40 % 49 165 318
30 % 49 165 334
Entity #71 | Chains: k
60S ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2255
95 % 1 32 2188
90 % 1 32 2220
70 % 1 32 2319
50 % 50 180 255
40 % 50 180 271
30 % 50 180 291
Entity #72 | Chains: l
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 63 733
95 % 7 67 922
90 % 7 67 964
70 % 7 70 930
50 % 7 70 971
40 % 7 70 1000
30 % 7 70 1049
Entity #73 | Chains: m
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 41 1207
95 % 7 68 901
90 % 7 68 945
70 % 49 164 267
50 % 50 176 270
40 % 50 178 279
30 % 51 179 294
Entity #74 | Chains: n
60S ribosomal protein L40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 35 1476
95 % 5 35 1933
90 % 5 36 1904
70 % 40 91 450
50 % 40 91 493
40 % 40 91 517
30 % 40 91 542
Entity #75 | Chains: o
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 72 555
95 % 10 75 717
90 % 10 75 759
70 % 48 147 286
50 % 48 147 342
40 % 48 147 351
30 % 48 147 368
Entity #76 | Chains: p
60S ribosomal protein L36a protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 652
95 % 7 68 890
90 % 7 68 932
70 % 49 164 268
50 % 51 171 288
40 % 51 172 293
30 % 51 172 316
Entity #77 | Chains: q
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 659
95 % 7 68 897
90 % 7 68 939
70 % 7 71 913
50 % 50 171 286
40 % 51 172 294
30 % 73 195 245
Entity #78 | Chains: r
60S ribosomal protein L28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2328
95 % 7 67 919
90 % 7 67 962
70 % 7 67 1001
50 % 7 67 1031
40 % 7 68 1047
30 % 7 70 1047
Entity #79 | Chains: t
28S ribosomal RNA rna, length: 3607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: SI
40S ribosomal protein S8 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 72 557
95 % 12 77 699
90 % 12 77 730
70 % 12 77 769
50 % 56 172 267
40 % 56 176 268
30 % 56 176 286
Entity #80 | Chains: v
A/A site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #81 | Chains: w
mRNA rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #82 | Chains: u
P/E site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #83 | Chains: y
Proprotein convertase subtilisin/kexin type 9 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 35432
95 % 1 3 29502
90 % 1 3 27567
70 % 1 3 25695
50 % 1 3 22556
40 % 1 3 20641
30 % 1 3 17997
Entity #9 | Chains: SK
40S ribosomal protein S10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2229
95 % 1 26 2827
90 % 1 26 2897
70 % 1 26 2951
50 % 1 27 2817
40 % 1 27 2821
30 % 1 27 2793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures