6OM7

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs


Sequence Similarity Clusters for the Entities in PDB 6OM7

Entity #1 | Chains: S2
18S ribosomal RNA rna, length: 1714 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: SL
40S ribosomal protein S11 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 532
95 % 12 78 712
90 % 12 78 744
70 % 12 79 771
50 % 65 187 242
40 % 65 187 255
30 % 65 187 269
Entity #11 | Chains: SP
40S ribosomal protein S15 protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7599
95 % 1 24 3351
90 % 1 24 3353
70 % 1 24 3439
50 % 2 26 3034
40 % 2 30 2615
30 % 2 30 2607
Entity #12 | Chains: SQ
40S ribosomal protein S16 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 70 607
95 % 6 70 818
90 % 6 70 858
70 % 6 73 847
50 % 61 182 253
40 % 65 190 249
30 % 66 191 263
Entity #13 | Chains: SR
40S ribosomal protein S17 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 51 983
95 % 12 77 730
90 % 12 77 765
70 % 12 78 788
50 % 60 165 308
40 % 60 165 322
30 % 60 165 344
Entity #14 | Chains: SS
40S ribosomal protein S18 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 528
95 % 12 78 714
90 % 12 78 747
70 % 65 173 260
50 % 67 182 255
40 % 72 192 246
30 % 72 192 261
Entity #15 | Chains: ST
40S ribosomal protein S19 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 40 1125
95 % 12 77 741
90 % 12 77 768
70 % 12 77 808
50 % 60 164 312
40 % 60 164 326
30 % 62 167 332
Entity #16 | Chains: SU
40S ribosomal protein S20 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 2479
95 % 1 26 2868
90 % 1 26 2945
70 % 1 26 2991
50 % 1 29 2667
40 % 5 37 2050
30 % 372 586 32
Entity #17 | Chains: SV
40S ribosomal protein S21 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 62 706
95 % 12 76 749
90 % 12 76 780
70 % 12 77 803
50 % 58 166 311
40 % 58 166 325
30 % 58 166 347
Entity #18 | Chains: SX
40S ribosomal protein S23 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 553
95 % 12 80 691
90 % 12 81 718
70 % 67 194 197
50 % 72 204 211
40 % 72 204 227
30 % 72 204 244
Entity #19 | Chains: Sa
40S ribosomal protein S26 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2224
95 % 1 29 2525
90 % 1 29 2581
70 % 1 29 2627
50 % 39 82 542
40 % 39 82 584
30 % 39 82 600
Entity #2 | Chains: SA
40S ribosomal protein SA protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 3908
95 % 1 27 2767
90 % 1 27 2887
70 % 1 27 2915
50 % 14 57 1033
40 % 50 128 404
30 % 50 128 419
Entity #20 | Chains: Sc
40S ribosomal protein S28 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 59 744
95 % 12 59 1032
90 % 12 59 1071
70 % 65 181 244
50 % 71 192 233
40 % 72 193 242
30 % 72 193 257
Entity #21 | Chains: Sd
40S ribosomal protein S29 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 71 593
95 % 12 75 760
90 % 12 75 787
70 % 59 158 281
50 % 61 166 300
40 % 65 174 285
30 % 65 174 313
Entity #22 | Chains: Sg
Receptor of activated protein C kinase 1 protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 77 515
95 % 13 77 697
90 % 13 77 726
70 % 14 79 751
50 % 65 166 292
40 % 67 172 273
30 % 67 173 290
Entity #23 | Chains: SC
40S ribosomal protein S2 protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 4869
95 % 1 29 2541
90 % 1 29 2602
70 % 1 32 2311
50 % 14 57 1032
40 % 14 57 1064
30 % 14 57 1112
Entity #24 | Chains: SG
40S ribosomal protein S6 protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 556
95 % 12 77 722
90 % 12 77 764
70 % 16 83 736
50 % 63 172 301
40 % 63 177 297
30 % 63 177 323
Entity #25 | Chains: SJ
40S ribosomal protein S9 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 547
95 % 12 77 734
90 % 12 77 770
70 % 65 175 253
50 % 67 190 239
40 % 71 198 233
30 % 71 198 249
Entity #26 | Chains: SM
40S ribosomal protein S12 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 19490
95 % 1 5 17177
90 % 1 5 16880
70 % 12 75 827
50 % 12 76 855
40 % 12 76 889
30 % 12 76 924
Entity #27 | Chains: SN
40S ribosomal protein S13 protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 548
95 % 12 77 740
90 % 12 77 772
70 % 65 180 247
50 % 67 187 243
40 % 71 195 238
30 % 72 196 254
Entity #28 | Chains: SO
40S ribosomal protein S14 protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 65 662
95 % 11 65 890
90 % 17 73 809
70 % 67 188 220
50 % 67 189 240
40 % 67 189 252
30 % 67 189 267
Entity #29 | Chains: SW
40S ribosomal protein S15a protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 537
95 % 12 78 720
90 % 12 78 753
70 % 66 191 223
50 % 73 202 215
40 % 73 202 229
30 % 443 763 22
Entity #3 | Chains: SB
40S ribosomal protein S3a protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 22 2853
95 % 1 26 2835
90 % 1 26 2912
70 % 1 26 2955
50 % 1 29 2666
40 % 1 29 2693
30 % 5 37 2056
Entity #30 | Chains: SY
40S ribosomal protein S24 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 72 589
95 % 12 77 733
90 % 12 77 769
70 % 12 78 791
50 % 62 182 268
40 % 62 182 279
30 % 62 182 304
Entity #31 | Chains: SZ
40S ribosomal protein S25 protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 3036
95 % 1 21 3718
90 % 1 21 3792
70 % 1 21 3777
50 % 12 44 1288
40 % 12 44 1326
30 % 12 44 1362
Entity #32 | Chains: Sb
40S ribosomal protein S27 protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 77 542
95 % 12 77 737
90 % 12 77 757
70 % 59 165 271
50 % 61 177 272
40 % 61 177 280
30 % 61 177 306
Entity #33 | Chains: Se
40S ribosomal protein S30 protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 1438
95 % 1 36 1890
90 % 1 49 1412
70 % 1 51 1387
50 % 66 160 366
40 % 66 160 384
30 % 66 160 399
Entity #34 | Chains: Sf
40S ribosomal protein S27a protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2389
95 % 1 29 2536
90 % 1 29 2595
70 % 40 73 629
50 % 40 77 640
40 % 40 77 678
30 % 40 77 703
Entity #35 | Chains: A
60S ribosomal protein L8 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 697
95 % 7 68 943
90 % 7 68 985
70 % 56 168 273
50 % 57 181 273
40 % 125 252 198
30 % 125 252 208
Entity #36 | Chains: B
60S ribosomal protein L3 protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2395
95 % 7 68 922
90 % 7 68 989
70 % 7 69 996
50 % 58 192 244
40 % 58 192 256
30 % 58 194 268
Entity #37 | Chains: C
60S ribosomal protein L4 protein, length: 363 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7360
95 % 5 39 1787
90 % 5 39 1824
70 % 5 39 1867
50 % 55 154 341
40 % 58 192 257
30 % 58 192 270
Entity #38 | Chains: D
5.8S ribosomal RNA rna, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #39 | Chains: E
5S ribosomal RNA rna, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: SD
40S ribosomal protein S3 protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 38 1185
95 % 6 67 871
90 % 6 67 908
70 % 6 68 927
50 % 53 160 323
40 % 53 160 338
30 % 53 160 355
Entity #40 | Chains: F
60S ribosomal protein L5 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2371
95 % 7 68 920
90 % 7 68 955
70 % 7 68 1004
50 % 57 177 286
40 % 58 179 288
30 % 58 179 314
Entity #41 | Chains: G
60S ribosomal protein L6 protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14527
95 % 1 14 5815
90 % 1 24 3152
70 % 1 24 3261
50 % 1 24 3247
40 % 1 25 3167
30 % 1 25 3120
Entity #42 | Chains: H
60S ribosomal protein L7 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 32 1710
95 % 7 68 931
90 % 7 68 966
70 % 7 68 1017
50 % 57 179 280
40 % 57 179 292
30 % 57 178 320
Entity #43 | Chains: I
60S ribosomal protein L7a protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 8100
95 % 5 49 1387
90 % 5 49 1431
70 % 5 49 1464
50 % 58 163 331
40 % 58 165 339
30 % 58 165 357
Entity #44 | Chains: J
60S ribosomal protein L9 protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 34 1576
95 % 7 68 916
90 % 7 68 960
70 % 7 68 1014
50 % 56 187 263
40 % 57 189 265
30 % 125 260 202
Entity #45 | Chains: K
60S ribosomal protein L10 protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 14 5184
95 % 7 51 1320
90 % 7 68 972
70 % 7 80 828
50 % 56 170 306
40 % 56 170 317
30 % 56 170 341
Entity #46 | Chains: L
60S ribosomal protein L11 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 61 790
95 % 8 69 908
90 % 8 69 939
70 % 58 180 252
50 % 60 184 261
40 % 60 184 275
30 % 60 184 299
Entity #47 | Chains: M
60S ribosomal protein L13 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2337
95 % 7 67 955
90 % 7 67 996
70 % 7 67 1040
50 % 7 69 1026
40 % 56 177 300
30 % 56 177 325
Entity #48 | Chains: N
60S ribosomal protein L14 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7350
95 % 1 25 2996
90 % 1 28 2687
70 % 1 28 2723
50 % 1 28 2744
40 % 1 29 2708
30 % 1 29 2695
Entity #49 | Chains: O
60S ribosomal protein L15 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 680
95 % 7 68 929
90 % 7 68 991
70 % 57 177 262
50 % 59 191 249
40 % 59 191 262
30 % 59 191 276
Entity #5 | Chains: SE
40S ribosomal protein S4, X isoform protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 51 887
95 % 12 65 899
90 % 12 77 773
70 % 62 171 266
50 % 64 181 258
40 % 64 185 263
30 % 69 194 258
Entity #50 | Chains: P
60S ribosomal protein L13a protein, length: 195 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2319
95 % 7 68 951
90 % 7 68 953
70 % 7 68 1033
50 % 57 179 276
40 % 57 180 284
30 % 57 180 312
Entity #51 | Chains: Q
60S ribosomal protein L17 protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 2535
95 % 1 33 2122
90 % 1 33 2175
70 % 1 33 2281
50 % 57 189 251
40 % 57 189 266
30 % 57 189 281
Entity #52 | Chains: R
60S ribosomal protein L18 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2388
95 % 3 64 1029
90 % 7 68 981
70 % 7 69 993
50 % 56 180 287
40 % 56 185 282
30 % 56 185 308
Entity #53 | Chains: S
60S ribosomal protein L19 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 65 731
95 % 8 69 914
90 % 8 69 946
70 % 8 70 975
50 % 59 179 282
40 % 59 180 289
30 % 59 180 316
Entity #54 | Chains: T
60S ribosomal protein L18a protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2338
95 % 3 58 1148
90 % 3 58 1181
70 % 7 62 1122
50 % 55 170 316
40 % 56 171 318
30 % 56 172 339
Entity #55 | Chains: U
60S ribosomal protein L21 protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 704
95 % 7 68 917
90 % 7 68 949
70 % 7 69 994
50 % 56 169 313
40 % 56 175 310
30 % 58 182 310
Entity #56 | Chains: V
60S ribosomal protein L22 protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 3027
95 % 1 29 2544
90 % 1 29 2605
70 % 1 29 2647
50 % 1 33 2345
40 % 14 57 1074
30 % 14 58 1084
Entity #57 | Chains: W
60S ribosomal protein L23 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 692
95 % 7 68 944
90 % 7 68 986
70 % 57 191 227
50 % 57 192 245
40 % 57 192 258
30 % 57 192 272
Entity #58 | Chains: X
60S ribosomal protein L24 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 7347
95 % 1 11 8213
90 % 1 11 8019
70 % 1 11 7898
50 % 9 20 3244
40 % 9 20 3248
30 % 9 20 3203
Entity #59 | Chains: Y
60S ribosomal protein L23a protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 2059
95 % 1 28 2725
90 % 1 28 2677
70 % 1 29 2646
50 % 14 54 1104
40 % 14 54 1117
30 % 14 54 1168
Entity #6 | Chains: SF
40S ribosomal protein S5 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 78 533
95 % 12 78 713
90 % 12 78 745
70 % 18 93 647
50 % 67 191 236
40 % 67 191 247
30 % 67 191 262
Entity #60 | Chains: Z
60S ribosomal protein L26 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 69 673
95 % 8 69 905
90 % 8 69 938
70 % 8 65 1070
50 % 58 190 247
40 % 58 190 260
30 % 58 190 275
Entity #61 | Chains: a
60S ribosomal protein L27 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 705
95 % 7 67 954
90 % 7 67 995
70 % 7 67 1039
50 % 55 165 326
40 % 56 178 295
30 % 57 180 317
Entity #62 | Chains: b
60S ribosomal protein L27a protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2357
95 % 7 68 930
90 % 7 68 964
70 % 7 70 967
50 % 57 182 271
40 % 58 183 276
30 % 58 185 296
Entity #63 | Chains: c
60S ribosomal protein L29 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13606
95 % 1 9 9741
90 % 1 9 9673
70 % 1 11 7856
50 % 1 11 7395
40 % 1 11 7121
30 % 1 11 6689
Entity #64 | Chains: d
60S ribosomal protein L30 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 21 3003
95 % 1 28 2558
90 % 1 28 2622
70 % 8 74 903
50 % 53 143 355
40 % 53 143 368
30 % 53 143 386
Entity #65 | Chains: e
60S ribosomal protein L31 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 28 2103
95 % 1 28 2679
90 % 1 28 2747
70 % 1 28 2770
50 % 57 179 281
40 % 57 179 293
30 % 57 179 318
Entity #66 | Chains: f
60S ribosomal protein L32 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 694
95 % 7 68 939
90 % 7 68 980
70 % 7 69 990
50 % 58 183 267
40 % 58 187 270
30 % 58 188 284
Entity #67 | Chains: g
60S ribosomal protein L35a protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 33 1670
95 % 7 67 960
90 % 7 67 1002
70 % 7 67 1045
50 % 55 175 304
40 % 56 177 308
30 % 56 177 330
Entity #68 | Chains: h
60S ribosomal protein L34 protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 67 709
95 % 7 67 963
90 % 7 67 1006
70 % 7 67 1036
50 % 55 164 328
40 % 55 164 342
30 % 55 164 358
Entity #69 | Chains: i
60S ribosomal protein L35 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 27 2169
95 % 8 69 909
90 % 8 69 940
70 % 8 69 989
50 % 57 182 278
40 % 58 193 254
30 % 59 195 266
Entity #7 | Chains: SH
40S ribosomal protein S7 protein, length: 189 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 76 550
95 % 12 77 729
90 % 12 77 762
70 % 12 78 785
50 % 64 178 277
40 % 64 178 290
30 % 66 181 291
Entity #70 | Chains: j
60S ribosomal protein L36 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 33 1671
95 % 7 67 961
90 % 7 67 1003
70 % 7 67 1046
50 % 7 69 1025
40 % 56 172 311
30 % 56 172 337
Entity #71 | Chains: k
60S ribosomal protein L37 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2356
95 % 1 32 2281
90 % 1 32 2338
70 % 1 32 2363
50 % 57 187 257
40 % 57 187 271
30 % 57 187 287
Entity #72 | Chains: l
60S ribosomal protein L38 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 64 754
95 % 8 68 934
90 % 8 68 970
70 % 8 71 950
50 % 8 71 986
40 % 8 71 1012
30 % 8 71 1056
Entity #73 | Chains: m
60S ribosomal protein L39 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 41 1251
95 % 7 68 923
90 % 7 68 957
70 % 56 171 270
50 % 57 183 265
40 % 57 185 274
30 % 58 186 294
Entity #74 | Chains: n
60S ribosomal protein L40 protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 35 1538
95 % 5 35 2017
90 % 5 36 2006
70 % 42 93 464
50 % 42 93 498
40 % 42 93 534
30 % 42 93 553
Entity #75 | Chains: o
60S ribosomal protein L41 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 72 582
95 % 10 75 764
90 % 10 75 793
70 % 55 154 289
50 % 55 154 337
40 % 55 154 354
30 % 55 154 367
Entity #76 | Chains: p
60S ribosomal protein L36a protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 699
95 % 7 68 950
90 % 7 68 973
70 % 56 168 277
50 % 58 175 296
40 % 58 176 302
30 % 58 176 327
Entity #77 | Chains: q
60S ribosomal protein L37a protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 68 682
95 % 7 68 932
90 % 7 68 967
70 % 7 71 948
50 % 57 178 283
40 % 58 179 291
30 % 80 202 253
Entity #78 | Chains: r
60S ribosomal protein L28 protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 25 2372
95 % 7 67 959
90 % 7 67 1001
70 % 7 67 1044
50 % 7 67 1073
40 % 7 68 1088
30 % 7 70 1080
Entity #79 | Chains: t
28S ribosomal RNA rna, length: 3607 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: SI
40S ribosomal protein S8 protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 72 583
95 % 12 77 732
90 % 12 77 767
70 % 12 77 807
50 % 64 180 260
40 % 64 184 267
30 % 64 184 282
Entity #80 | Chains: v
A/A site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #81 | Chains: w
mRNA rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #82 | Chains: u
P/E site tRNA rna, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #83 | Chains: y
Proprotein convertase subtilisin/kexin type 9 protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 31441
95 % 1 3 29781
90 % 1 3 28611
70 % 1 3 23661
50 % 1 3 22661
40 % 1 3 20735
30 % 1 3 17057
Entity #9 | Chains: SK
40S ribosomal protein S10 protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 26 2238
95 % 1 26 2920
90 % 1 26 2997
70 % 1 26 3040
50 % 1 27 2898
40 % 1 27 2899
30 % 1 27 2884

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures