Crystal structure of the hexameric purine nucleoside phosphorylase from Bacillus subtilis in space group H32 at pH 7.5

Structural Similarities for the Entities in PDB 4D98

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,B

Description: Purine nucleoside phosphorylase deoD-type protein | Length: 253

No structure alignment results are available for 4D98.A, 4D98.B explicitly.

These chains are represented by chain 4RJ2.A which has more than 50% sequence identity.

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View how chain 4D98.B compares with the representative chain PDP:4RJ2Aa. Select a comparison method: