Structure of rabbit RyR1 (EGTA-only dataset, class 2)

Structural Similarities for the Entities in PDB 5TB2

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

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Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,F,H,J

Description: Peptidyl-prolyl cis-trans isomerase FKBP1B protein | Length: 108

No structure alignment results are available for 5TB2.A, 5TB2.F, 5TB2.H, 5TB2.J explicitly.

These chains are represented by chain 2PPN.a which is 100% sequence identical.

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View how chain 5TB2.J compares with the representative chain d2ppna1. Select a comparison method:

Entity #2 | Chains B,E,G,I

Description: Ryanodine receptor 1 protein | Length: 4416