human m-AAA protease AFG3L2, substrate-bound

Structural Similarities for the Entities in PDB 6NYY

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,C,D,E,F

Description: AFG3-like protein 2 protein | Length: 529

No structure alignment results are available for 6NYY.A, 6NYY.B, 6NYY.C, 6NYY.D, 6NYY.E, 6NYY.F explicitly.

These chains are represented by chain 2CE7.a which has more than 40% sequence identity.

Show structure comparison results


View how chain 6NYY.F compares with the representative chain d2ce7a1. Select a comparison method:

Entity #2 | Chains G,H,I,J

Description: Substrate protein | Length: 11

This entity is too short to be considered for the all vs. all structure alignments.