AFG3L2 - AFG3 like matrix AAA peptidase subunit 2

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 2 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9Y4W6 HGNC Approved Gene Symbol: AFG3L2 
Previous Symbols: SCA28 Ensembl ENSG00000141385 
Synonyms : SPAX5 Previous Names: "AFG3 (ATPase family gene 3, yeast)-like 2", "spinocerebellar ataxia 28", "AFG3 ATPase family member 3-like 2 (S. cerevisiae)", "AFG3 like AAA ATPase 2"
HgncId : HGNC:315  Omim: 604581 
Refseq: NM_006796  GenBank: Y18314 
 
Genomic coordinates: Cytogenetic location: 18p11.21 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

AFG3L2 Gene Structure

Chromosome: chr18
Genbank ID: NM_006796 Orientation: -
Length coding sequence : 2391 nucleotides.
Regionstartendregion lengthphase at end
UTR
12,377,08212,377,275
Exon12,376,96812,377,0811140
Exon12,371,59112,371,6901001
Exon12,370,84812,370,925781
Exon12,367,27512,367,3811070
Exon12,366,96412,367,1161530
Exon12,363,78112,363,855750
Exon12,359,92612,360,0501252
Exon12,358,66912,358,9422740
Exon12,356,69312,356,8301380
Exon12,353,00412,353,1571541
Exon12,351,30512,351,4121081
Exon12,351,08412,351,2091261
Exon12,348,27212,348,3821111
Exon12,344,13112,344,2461160
Exon12,340,20012,340,4002010
Exon12,337,34012,337,5341950
Exon12,329,56412,329,7822190
UTR
12,328,94312,329,563