DCAF1 - DDB1 and CUL4 associated factor 1

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 8 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q9Y4B6 HGNC Approved Gene Symbol: DCAF1 
Previous Symbols: VPRBP Ensembl ENSG00000145041 
Synonyms : KIAA0800, MGC102804 Previous Names: "Vpr (HIV-1) binding protein"
HgncId : HGNC:30911  Omim: 617259 
Refseq: NM_014703  GenBank: AB018343 
 
Genomic coordinates: Cytogenetic location: 3p21.2 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

DCAF1 Gene Structure

Chromosome: chr3
Genbank ID: NM_014703 Orientation: -
Length coding sequence : 4362 nucleotides.
Regionstartendregion lengthphase at end
UTR51,533,88851,534,018
UTR51,530,74951,530,796
UTR
51,517,84551,517,852
Exon51,517,73551,517,8441102
Exon51,504,94551,505,021771
Exon51,500,81951,500,892740
Exon51,497,13051,497,2431140
Exon51,477,78251,477,9191380
Exon51,475,40151,475,9135130
Exon51,474,98651,475,0871020
Exon51,467,48551,467,6641800
Exon51,466,71351,466,9222100
Exon51,464,82351,464,9921702
Exon51,459,75851,459,8821251
Exon51,457,18851,458,45112642
Exon51,456,13251,456,3301990
Exon51,455,57051,455,652832
Exon51,454,24151,454,325850
Exon51,452,07851,452,3112340
Exon51,451,40451,451,497941
Exon51,450,73651,450,8401051
Exon51,450,44751,450,520740
Exon51,449,83351,449,9341020
Exon51,440,57751,440,8292531
Exon51,436,20051,436,258590
UTR
51,436,16651,436,199
UTR51,433,29751,434,555