MLH1 - mutL homolog 1

 

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The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 3 View list of all current human gene IDs
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Cross References
UniProt: P40692 HGNC Approved Gene Symbol: MLH1 
Previous Symbols: COCA2 Ensembl ENSG00000076242 
Synonyms : HNPCC, FCC2, HNPCC2 Previous Names: "mutL (E. coli) homolog 1 (colon cancer, nonpolyposis type 2)", "mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)"
HgncId : HGNC:7127  Omim: 120436 
Refseq: NM_000249  GenBank: U07418 
 
Currently highlighted: Genomic position: chr3:37,058,997 View in genomic position mapping tool
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

MLH1 Gene Structure

Chromosome: chr3
Genbank ID: NM_000249 Orientation: +
Length coding sequence : 2268 nucleotides.
Regionstartendregion lengthphase at end
UTR37,034,84037,035,038
Exon37,035,03937,035,1541162
Exon37,038,11037,038,200910
Exon37,042,44637,042,544990
Exon37,045,89237,045,965742
Exon37,048,48237,048,554730
Exon37,050,30537,050,396922
Exon37,053,31137,053,353430
Exon37,053,50237,053,590892
Exon37,055,92337,056,0351131
Exon37,058,99737,059,090942
Exon37,061,80137,061,9541540
Exon37,067,12837,067,4983712
Exon37,070,27537,070,4231491
Exon37,081,67737,081,7851092
Exon37,083,75937,083,822640
Exon37,089,01037,089,1741650
Exon37,090,00837,090,100930
Exon37,090,39537,090,5081140
Exon37,091,97737,092,1441680
UTR37,092,14537,092,337