NOD2 - nucleotide binding oligomerization domain containing 2

 

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Cross References
UniProt: Q9HC29 HGNC Approved Gene Symbol: NOD2 
Previous Symbols: IBD1, CARD15 Ensembl ENSG00000167207 
Synonyms : BLAU, CD, PSORAS1, CLR16.3, NLRC2 Previous Names: "caspase recruitment domain family, member 15"
HgncId : HGNC:5331  Omim: 605956 
Refseq: NM_022162  GenBank: AF178930 
 
Genomic coordinates: Cytogenetic location: 16q12.1 reset view
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The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

NOD2 Gene Structure

Chromosome: chr16
Genbank ID: NM_022162 Orientation: +
Length coding sequence : 3120 nucleotides.
Regionstartendregion lengthphase at end
UTR50,731,04950,731,154
Exon50,731,15550,731,227731
Exon50,733,39950,733,8654670
Exon50,741,76650,741,8711061
Exon50,744,46950,746,28418162
Exon50,750,49850,750,581842
Exon50,750,80250,750,885842
Exon50,753,83650,753,919842
Exon50,756,53350,756,616842
Exon50,757,21250,757,295842
Exon50,759,40050,759,483842
Exon50,763,72950,763,812842
Exon50,765,65850,765,730730
UTR50,765,73150,766,988