PCSK9 - proprotein convertase subtilisin/kexin type 9

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Number of PDB entities (unique chains) for this gene: 63 View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: Q8NBP7 HGNC Approved Gene Symbol: PCSK9 
Previous Symbols: HCHOLA3 Ensembl ENSG00000169174 
Synonyms : NARC-1, FH3 Previous Names: "hypercholesterolemia, autosomal dominant 3"
HgncId : HGNC:20001  Omim: 607786 
Refseq: NM_174936  GenBank: AX207686 
 
Genomic coordinates: Cytogenetic location: 1p32.3 reset view
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

PCSK9 Gene Structure

Chromosome: chr1
Genbank ID: NM_174936 Orientation: +
Length coding sequence : 2076 nucleotides.
Regionstartendregion lengthphase at end
UTR55,505,14855,505,510
Exon55,505,51155,505,7172070
Exon55,509,51655,509,7071920
Exon55,512,19655,512,3191241
Exon55,517,95155,518,0841340
Exon55,518,32355,518,4641421
Exon55,521,66655,521,8621970
Exon55,523,00455,523,1871841
Exon55,523,70955,523,8821741
Exon55,524,17255,524,3201490
Exon55,525,15955,525,3361781
Exon55,527,04855,527,2291820
Exon55,529,04255,529,2572160
UTR55,529,25855,530,526