RORC - RAR related orphan receptor C

 

Gene View  

The Gene Browser allows to navigate the human genome and investigate the relationship between PDB entries and genes.

Find PDB entities (unique chains) for RORC View list of all current human gene IDs
View protein features Protein Feature View
Cross References
UniProt: P51449 HGNC Approved Gene Symbol: RORC 
Ensembl ENSG00000143365 
Synonyms : RZRG, RORG, NR1F3, TOR Previous Names: "RAR-related orphan receptor C"
HgncId : HGNC:10260  Omim: 602943 
GenBank: U16997 
 
Genomic coordinates: Cytogenetic location: 1q21 reset view
Currently highlighted: Genomic position: chr1:151,785,533 View in genomic position mapping tool
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Legend

The genome browser is based on Biodalliance browser  
The tracks display the following information:

Track Info Data Source
Genome A ruler that provides location information. If the zoom level is high enough, it can show the nucleotides at the corresponding location, or a graphical encoding for each nucleotide (A: green, T: red, G: yellow, C: blue). GRCh37 assembly  
PDB The blue boxes on this track indicate regions for which coordinates have been observed in PDB. Clicking on this track shows additional information and links for more information. RCSB PDB
Gene This track represents the gene-structure on the genome. White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent introns. Gencode  
Repeats This track shows various repeat regions that have been annotated along the genome. UCSC genome browser  
Conservation PhastCons conservation scores derived from multiple alignments of 45 vertebrate genomes to the human genome. UCSC genome browser  

RORC Gene Structure

Chromosome: chr1
Genbank ID: NM_001001523 Orientation: -
Length coding sequence : 1491 nucleotides.
Regionstartendregion lengthphase at end
UTR
151,798,413151,798,553
Exon151,798,406151,798,41271
Exon151,789,671151,789,756860
Exon151,789,140151,789,2811421
Exon151,787,389151,787,9015131
Exon151,787,050151,787,1711220
Exon151,785,964151,786,0961331
Exon151,785,715151,785,8221081
Exon151,785,423151,785,5331111
Exon151,783,801151,783,9101100
Exon151,779,948151,780,1091620
UTR
151,778,547151,779,947